RNA–Protein interactions for RNA: ENST00000477347.1

RPSAP55-201, Transcript of ribosomal protein SA pseudogene 55, humanhuman

BASIC

Gene RPSAP55, Length 876 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP55-201ENST00000477347 BARHL2Q9NY43 387 aa11.27□□□□□ -0.61
RPSAP55-201ENST00000477347 ABT1Q9ULW3 272 aaKnown RBP11.27□□□□□ -0.61
RPSAP55-201ENST00000477347 A0A0G2JLL6 359 aaPredicted RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 SMCO2A6NFE2 343 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 ADCY7P51828 1080 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 FKBP1BP68106 108 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 IRX3P78415 501 aaPredicted RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 NBR1Q14596 966 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 UBE2SQ16763 222 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 PRRT2Q7Z6L0 340 aaPredicted RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 BLIDQ8IZY5 108 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 RBM46Q8TBY0 533 aaKnown RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 AMNQ9BXJ7 453 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 FTOQ9C0B1 505 aaKnown RBP eCLIP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 RAVER2Q9HCJ3 691 aaKnown RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 HOMER2Q9NSB8 354 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 TFIP11Q9UBB9 837 aaKnown RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 CCPG1Q9ULG6 757 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 UTRNP46939 3433 aa11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
RPSAP55-201ENST00000477347 TCHHQ07283 1943 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 CCL15-CCL14A0A0B4J2E2 113 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 CXCL11O14625 94 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 PEX10O60683 326 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 ZBED4O75132 1171 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 ALAS1P13196 640 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 CALML3P27482 149 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 ZNF157P51786 506 aaPredicted RBP11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 SNAPC2Q13487 334 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 PLS1Q14651 629 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 CCL15Q16663 113 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 SH3D19Q5HYK7 790 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 PIK3AP1Q6ZUJ8 805 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 AGBL1Q96MI9 1066 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 ZSCAN16Q9H4T2 348 aaPredicted RBP11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 BIN2Q9UBW5 565 aaPredicted RBP11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 KCNH4Q9UQ05 1017 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 PASKQ96RG2 1323 aa11.25□□□□□ -0.61
RPSAP55-201ENST00000477347 CCDC194A0A1B0GVG4 234 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 hCG_1984214I3L0E3 225 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 DSG3P32926 999 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 KRT85P78386 507 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 NFKBIBQ15653 356 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 EARS2Q5JPH6 523 aaKnown RBP11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 MYSM1Q5VVJ2 828 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 CATSPERGQ6ZRH7 1159 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 ZNF713Q8N859 430 aaPredicted RBP11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 ZNF396Q96N95 335 aaPredicted RBP11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 RLFQ13129 1914 aa11.24□□□□□ -0.61
RPSAP55-201ENST00000477347 SMCHD1A6NHR9 2005 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 GOLGA6L22H0YM25 854 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 PLA2G6O60733 806 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 TOMM70O94826 608 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 OSBPP22059 807 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 GTF2A2P52657 109 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 COG2Q14746 738 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 NPY5RQ15761 445 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 SPRYD7Q5W111 196 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 RGMBQ6NW40 437 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 BRAPQ7Z569 592 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 NOSTRINQ8IVI9 506 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 REXO1Q8N1G1 1221 aaKnown RBP11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 CUL5Q93034 780 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 USP28Q96RU2 1077 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 FOXP1Q9H334 677 aaPredicted RBP11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 NOL7Q9UMY1 257 aaKnown RBP11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 PCDHA6Q9UN73 950 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 AGTPBP1Q9UPW5 1226 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 PCDHA8Q9Y5H6 950 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
RPSAP55-201ENST00000477347 VWA5AO00534 786 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms