RNA–Protein interactions for RNA: ENST00000476691.1

CDK5-203, Transcript of cyclin dependent kinase 5, humanhuman

TSL 4

Gene CDK5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-203ENST00000476691 FBXO11Q86XK2 927 aa15.25■□□□□ 0.03
CDK5-203ENST00000476691 SPICE1Q8N0Z3 855 aa15.25■□□□□ 0.03
CDK5-203ENST00000476691 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
CDK5-203ENST00000476691 RIC8AQ9NPQ8 531 aa15.25■□□□□ 0.03
CDK5-203ENST00000476691 DDX19AQ9NUU7 478 aaKnown RBP15.25■□□□□ 0.03
CDK5-203ENST00000476691 PRR12Q9ULL5 1215 aa15.25■□□□□ 0.03
CDK5-203ENST00000476691 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
CDK5-203ENST00000476691 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
CDK5-203ENST00000476691 ADM5C9JUS6 153 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 M0R2N6 131 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 CUTAO60888 179 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 VEGFAP15692 232 aaPredicted RBP15.24■□□□□ 0.03
CDK5-203ENST00000476691 BACE1P56817 501 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 NONOQ15233 471 aaKnown RBP eCLIP15.24■□□□□ 0.03
CDK5-203ENST00000476691 PTPAQ15257 358 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
CDK5-203ENST00000476691 CCDC183Q5T5S1 534 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 PRAMEF18Q5VWM3 479 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
CDK5-203ENST00000476691 COA7Q96BR5 231 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 CDCA5Q96FF9 252 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 C12orf42Q96LP6 360 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 NAP1L4Q99733 375 aaKnown RBP15.24■□□□□ 0.03
CDK5-203ENST00000476691 TMOD4Q9NZQ9 345 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
CDK5-203ENST00000476691 UNCXA6NJT0 531 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 TOB1P50616 345 aaPredicted RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 SPP2Q13103 211 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 MAP3K11Q16584 847 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 ARMC9Q7Z3E5 817 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 ANKRD13AQ8IZ07 590 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 PRPF38AQ8NAV1 312 aaKnown RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 MRPS27Q92552 414 aaKnown RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 ZKSCAN4Q969J2 545 aaPredicted RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 PGBD1Q96JS3 809 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 SLF1Q9BQI6 1058 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 GLIS2Q9BZE0 524 aaPredicted RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
CDK5-203ENST00000476691 RANBP17Q9H2T7 1088 aaKnown RBP15.23■□□□□ 0.03
CDK5-203ENST00000476691 PCDHA7Q9UN72 937 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 ZHX2Q9Y6X8 837 aa15.23■□□□□ 0.03
CDK5-203ENST00000476691 PHIPQ8WWQ0 1821 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 PAPPA2Q9BXP8 1791 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 LAD1O00515 517 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 MTMR2Q13614 643 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 GSE1Q14687 1217 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
CDK5-203ENST00000476691 FERMT2Q96AC1 680 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 PSTPIP2Q9H939 334 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.22■□□□□ 0.03
CDK5-203ENST00000476691 CLEC11AQ9Y240 323 aa15.22■□□□□ 0.03
CDK5-203ENST00000476691 CTDP1Q9Y5B0 961 aaPredicted RBP15.22■□□□□ 0.03
CDK5-203ENST00000476691 ABCB11O95342 1321 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 POTECB2RU33 542 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 PPP1R11O60927 126 aaPredicted RBP15.21■□□□□ 0.03
CDK5-203ENST00000476691 FOSP01100 380 aaPredicted RBP15.21■□□□□ 0.03
CDK5-203ENST00000476691 VCAM1P19320 739 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 CMA1P23946 247 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 KIAA1755Q5JYT7 1200 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 NEK8Q86SG6 692 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 CCDC84Q86UT8 332 aaPredicted RBP15.21■□□□□ 0.03
CDK5-203ENST00000476691 FSIP1Q8NA03 581 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
CDK5-203ENST00000476691 KIFC2Q96AC6 838 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 GZF1Q9H116 711 aaPredicted RBP15.21■□□□□ 0.03
CDK5-203ENST00000476691 MRPL11Q9Y3B7 192 aaKnown RBP15.21■□□□□ 0.03
CDK5-203ENST00000476691 PCDHB6Q9Y5E3 794 aa15.21■□□□□ 0.03
CDK5-203ENST00000476691 OTOFQ9HC10 1997 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 CTAGE5O15320 804 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 ZBED4O75132 1171 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 PTPREP23469 700 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 ZNF445P59923 1031 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 FAM160A1Q05DH4 1040 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 PPATQ06203 517 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 VGLL4Q14135 290 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 TTLL12Q14166 644 aaPredicted RBP15.2■□□□□ 0.02
CDK5-203ENST00000476691 ZSCAN23Q3MJ62 389 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 SH3D19Q5HYK7 790 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 EARS2Q5JPH6 523 aaKnown RBP15.2■□□□□ 0.02
CDK5-203ENST00000476691 ARL6IP4Q66PJ3 421 aaKnown RBP15.2■□□□□ 0.02
CDK5-203ENST00000476691 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.2■□□□□ 0.02
CDK5-203ENST00000476691 TANGO6Q9C0B7 1094 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 NUP62CLQ9H1M0 184 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 TMEM63CQ9P1W3 806 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
CDK5-203ENST00000476691 AFG3L2Q9Y4W6 797 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 SRPRBQ9Y5M8 271 aaKnown RBP15.2■□□□□ 0.02
CDK5-203ENST00000476691 SNCAIPQ9Y6H5 919 aa15.2■□□□□ 0.02
CDK5-203ENST00000476691 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
CDK5-203ENST00000476691 FAM205CA6NFA0 338 aa15.19■□□□□ 0.02
CDK5-203ENST00000476691 KINO60870 393 aaKnown RBP15.19■□□□□ 0.02
CDK5-203ENST00000476691 FLOT1O75955 427 aa15.19■□□□□ 0.02
CDK5-203ENST00000476691 MARCKSP29966 332 aaPredicted RBP15.19■□□□□ 0.02
CDK5-203ENST00000476691 CLK2P49760 499 aaKnown RBP15.19■□□□□ 0.02
CDK5-203ENST00000476691 FKBP1BP68106 108 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms