RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TSC22D3Q99576 134 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 TAF1DQ9H5J8 278 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-206ENST00000476391 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC1-206ENST00000476391 RGL1Q9NZL6 768 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 ZFATQ9P243 1243 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 L3MBTL1Q9Y468 752 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 HYOU1Q9Y4L1 999 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 NCKAP5LQ9HCH0 1330 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 A0A1W2PQC6 194 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 RCCD1A6NED2 376 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 CCT8L1PA6NM43 557 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 CSB-PGBD3P0DP91 1061 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 CCND1P24385 295 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 TCP11X2Q5H9J9 407 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 MB21D2Q8IYB1 491 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-206ENST00000476391 EZH1Q92800 747 aaPredicted RBP15.34■□□□□ 0.05
HDAC1-206ENST00000476391 NFU1Q9UMS0 254 aa15.34■□□□□ 0.05
HDAC1-206ENST00000476391 B4DLN1 442 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 GCOM1H8Y6P7 765 aaPredicted RBP15.33■□□□□ 0.04
HDAC1-206ENST00000476391 ATP2C2O75185 946 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 MYZAPP0CAP1 466 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
HDAC1-206ENST00000476391 UBXN1Q04323 297 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 MTHFD1LQ6UB35 978 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 SH3RF1Q7Z6J0 888 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 TRIM74Q86UV6 250 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 TRIM73Q86UV7 250 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 CCDC155Q8N6L0 562 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 AGAP11Q8TF27 550 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 PLCB1Q9NQ66 1216 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 COPRSQ9NQ92 184 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
HDAC1-206ENST00000476391 DIP2AQ14689 1571 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 KDM3BQ7LBC6 1761 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 CLTAP09496 248 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 FAM153BP0C7A2 387 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 CARSP49589 748 aaKnown RBP15.33■□□□□ 0.04
HDAC1-206ENST00000476391 GRIN1Q05586 938 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 FAM153CQ494X1 144 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 CPLX4Q7Z7G2 160 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 GALNT15Q8N3T1 639 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 TAB2Q9NYJ8 693 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 SWAP70Q9UH65 585 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 FAM153AQ9UHL3 310 aa15.33■□□□□ 0.04
HDAC1-206ENST00000476391 MACROD2A1Z1Q3 448 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 KCNJ18B7U540 433 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 STXBP3O00186 592 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 DIAPH2O60879 1101 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ATP4AP20648 1035 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 HSPA9P38646 679 aaKnown RBP15.32■□□□□ 0.04
HDAC1-206ENST00000476391 CCNG1P51959 295 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 KCNJ12Q14500 433 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 MAATS1Q7Z4T9 603 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ANKS4BQ8N8V4 417 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 RNF14Q9UBS8 474 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 RWDD2AQ9UIY3 292 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 CTNND2Q9UQB3 1225 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 PLAAQ9Y263 795 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ECM29Q5VYK3 1845 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 CPDO75976 1380 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ABLIM1O14639 778 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ORC4O43929 436 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 PPFIA2O75334 1257 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ANXA1P04083 346 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 MRPS25P82663 173 aaKnown RBP15.32■□□□□ 0.04
HDAC1-206ENST00000476391 RILPL1Q5EBL4 403 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 PNMA8AQ86V59 439 aaPredicted RBP15.32■□□□□ 0.04
HDAC1-206ENST00000476391 CCDC197Q8NCU1 140 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 RAPGEF5Q92565 580 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 KCNMB3Q9NPA1 279 aa15.32■□□□□ 0.04
HDAC1-206ENST00000476391 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
HDAC1-206ENST00000476391 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 USO1O60763 962 aaKnown RBP15.31■□□□□ 0.04
HDAC1-206ENST00000476391 GLI1P08151 1106 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 PPP2R2AP63151 447 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 DPYDQ12882 1025 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 EIF1ADQ8N9N8 165 aaKnown RBP15.31■□□□□ 0.04
HDAC1-206ENST00000476391 KLHDC4Q8TBB5 520 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 CEP131Q9UPN4 1083 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 MAST3O60307 1309 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 GOLGA6L10A0A0M3HER8 536 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 GNAT1P11488 350 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 ITIH4Q14624 930 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 SEPT2Q15019 361 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 KIAA0753Q2KHM9 967 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 SPATA21Q7Z572 469 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 MB21D1Q8N884 522 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 NHEJ1Q9H9Q4 299 aaPredicted RBP15.31■□□□□ 0.04
HDAC1-206ENST00000476391 EPB41L5Q9HCM4 733 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 DUSP10Q9Y6W6 482 aa15.31■□□□□ 0.04
HDAC1-206ENST00000476391 MYH10P35580 1976 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 HEXIM1O94992 359 aaKnown RBP15.3■□□□□ 0.04
HDAC1-206ENST00000476391 SETSIPP0DME0 302 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 DRD4P21917 467 aa15.3■□□□□ 0.04
HDAC1-206ENST00000476391 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
HDAC1-206ENST00000476391 METAP2P50579 478 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC1-206ENST00000476391 TOB1P50616 345 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms