RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 TRIM29Q14134 588 aa13.42□□□□□ -0.26
BEST3-204ENST00000476098 FOXD4L5Q5VV16 416 aaPredicted RBP13.42□□□□□ -0.26
BEST3-204ENST00000476098 ZNF713Q8N859 430 aaPredicted RBP13.42□□□□□ -0.26
BEST3-204ENST00000476098 FOXD4L4Q8WXT5 416 aaPredicted RBP13.42□□□□□ -0.26
BEST3-204ENST00000476098 BRI3BPQ8WY22 251 aa13.42□□□□□ -0.26
BEST3-204ENST00000476098 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
BEST3-204ENST00000476098 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
BEST3-204ENST00000476098 ABT1Q9ULW3 272 aaKnown RBP13.42□□□□□ -0.26
BEST3-204ENST00000476098 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 VWA5AO00534 786 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 MMP1P03956 469 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 SLC10A3P09131 477 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 NPY5RQ15761 445 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 CCL15Q16663 113 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 FBXO11Q86XK2 927 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 FAM177A1Q8N128 213 aaPredicted RBP13.41□□□□□ -0.26
BEST3-204ENST00000476098 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 ZNF536O15090 1300 aa13.41□□□□□ -0.26
BEST3-204ENST00000476098 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 FAM155AB1AL88 458 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 F13A1P00488 732 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 FDX1P10109 184 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 NAPAP54920 295 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 NLRP5P59047 1200 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 FERMT3Q86UX7 667 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 REPS2Q8NFH8 660 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 ZMYND12Q9H0C1 365 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 ASCC2Q9H1I8 757 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 MYPNQ86TC9 1320 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 TESPA1A2RU30 521 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 BTBD19C9JJ37 291 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 ADAMTS3O15072 1205 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 ZBED4O75132 1171 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 ICAM1P05362 532 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 TAL1P17542 331 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 KIF23Q02241 960 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 RESTQ13127 1097 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 MCTP1Q6DN14 999 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 OXER1Q8TDS5 423 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 CCDC12Q8WUD4 166 aaPredicted RBP13.4□□□□□ -0.26
BEST3-204ENST00000476098 CCDC102AQ96A19 550 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 PTPN18Q99952 460 aa13.4□□□□□ -0.26
BEST3-204ENST00000476098 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 KIF28PB7ZC32 967 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 U2AF2P26368 475 aaKnown RBP eCLIP13.39□□□□□ -0.27
BEST3-204ENST00000476098 CALML3P27482 149 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 APLP1P51693 650 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
BEST3-204ENST00000476098 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.27
BEST3-204ENST00000476098 SAFBQ15424 915 aaKnown RBP eCLIP13.39□□□□□ -0.27
BEST3-204ENST00000476098 USH1GQ495M9 461 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 PPP1R18Q6NYC8 613 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 LBX2Q6XYB7 198 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 ANKRD23Q86SG2 305 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
BEST3-204ENST00000476098 TNPO1Q92973 898 aaKnown RBP13.39□□□□□ -0.27
BEST3-204ENST00000476098 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 RAVER2Q9HCJ3 691 aaKnown RBP13.39□□□□□ -0.27
BEST3-204ENST00000476098 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 SLC45A1Q9Y2W3 748 aa13.39□□□□□ -0.27
BEST3-204ENST00000476098 MANSC4A6NHS7 340 aaPredicted RBP13.38□□□□□ -0.27
BEST3-204ENST00000476098 PDHXO00330 501 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 OSBPP22059 807 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 TRAF1Q13077 416 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 NR5A1Q13285 461 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 CPXCR1Q8N123 301 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 FOXP1Q9H334 677 aaPredicted RBP13.38□□□□□ -0.27
BEST3-204ENST00000476098 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
BEST3-204ENST00000476098 C6orf50Q9HD87 102 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
BEST3-204ENST00000476098 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
BEST3-204ENST00000476098 M0R2N6 131 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 GNA11P29992 359 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 KRT2P35908 639 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 OAZ1P54368 228 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 HERVK_113P62684 666 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 BLIDQ8IZY5 108 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 TNFRSF25Q93038 417 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 PSTPIP2Q9H939 334 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 RIC8AQ9NPQ8 531 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 CTDP1Q9Y5B0 961 aaPredicted RBP13.37□□□□□ -0.27
BEST3-204ENST00000476098 RASSF10A6NK89 507 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 OPLAHO14841 1288 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 CYP2C8P10632 490 aa13.37□□□□□ -0.27
BEST3-204ENST00000476098 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms