RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ADD2P35612 726 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 RTP1P59025 263 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 TMEM179Q6ZVK1 233 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 KIF1BPQ96EK5 621 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
CALD1-217ENST00000475772 ADAMTS5Q9UNA0 930 aa12.61□□□□□ -0.39
CALD1-217ENST00000475772 APBB1O00213 710 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 SEPT4O43236 478 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 CDK8P49336 464 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 TMEM132BQ14DG7 1078 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 SNX17Q15036 470 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 SHHQ15465 462 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 HSP90AB4PQ58FF6 505 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 C12orf60Q5U649 245 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 FAM109BQ6ICB4 259 aaPredicted RBP12.6□□□□□ -0.39
CALD1-217ENST00000475772 SH3RF1Q7Z6J0 888 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 CLASRPQ8N2M8 674 aaKnown RBP12.6□□□□□ -0.39
CALD1-217ENST00000475772 TANGO6Q9C0B7 1094 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 BOLA2Q9H3K6 86 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 VCPKMTQ9H867 229 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 ZBTB40Q9NUA8 1239 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
CALD1-217ENST00000475772 ITGB8P26012 769 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 LRRC41Q15345 812 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 C9orf50Q5SZB4 431 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 RPAP2Q8IXW5 612 aaPredicted RBP12.59□□□□□ -0.39
CALD1-217ENST00000475772 ABRAQ8N0Z2 381 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 ARRDC4Q8NCT1 418 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 MAML3Q96JK9 1138 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
CALD1-217ENST00000475772 MROH8Q9H579 483 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
CALD1-217ENST00000475772 TRIM43BA6NCK2 446 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 USP17L12C9JPN9 530 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 USP17L21D6R901 530 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 FLOT1O75955 427 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 MBD4O95243 580 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 EEF2P13639 858 aaKnown RBP12.58□□□□□ -0.4
CALD1-217ENST00000475772 ATP5JP18859 108 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 ADCYAP1R1P41586 468 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 PLS1Q14651 629 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 TRIM60Q495X7 471 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 TJAP1Q5JTD0 557 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 MB21D1Q8N884 522 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 REPS2Q8NFH8 660 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 TRIM43Q96BQ3 446 aaPredicted RBP12.58□□□□□ -0.4
CALD1-217ENST00000475772 FAM161BQ96MY7 647 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
CALD1-217ENST00000475772 FBXO28Q9NVF7 368 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 ATP11BQ9Y2G3 1177 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 COG6Q9Y2V7 657 aa12.58□□□□□ -0.4
CALD1-217ENST00000475772 GREB1LQ9C091 1923 aaPredicted RBP12.58□□□□□ -0.4
CALD1-217ENST00000475772 IFIT2P09913 472 aaKnown RBP12.57□□□□□ -0.4
CALD1-217ENST00000475772 MS4A1P11836 297 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 TAL1P17542 331 aaPredicted RBP12.57□□□□□ -0.4
CALD1-217ENST00000475772 ICA1Q05084 483 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 ZNF792Q3KQV3 632 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 FAM47AQ5JRC9 791 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 C1orf53Q5VUE5 145 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 CTR9Q6PD62 1173 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 BADQ92934 168 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 FERMT2Q96AC1 680 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 HAUS7Q99871 368 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
CALD1-217ENST00000475772 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 PDLIM7Q9NR12 457 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 ZBED9Q6R2W3 1325 aa12.57□□□□□ -0.4
CALD1-217ENST00000475772 MCM3APO60318 1980 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
CALD1-217ENST00000475772 RAB11FIP3O75154 756 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 PGK2P07205 417 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 ZNF865P0CJ78 1059 aaPredicted RBP12.56□□□□□ -0.4
CALD1-217ENST00000475772 FCER1AP12319 257 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 RIOX2Q8IUF8 465 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 MTRQ99707 1265 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 COL25A1Q9BXS0 654 aaPredicted RBP12.56□□□□□ -0.4
CALD1-217ENST00000475772 SEMA6BQ9H3T3 888 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 ARHGEF10LQ9HCE6 1279 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 ZNF214Q9UL59 606 aaPredicted RBP12.56□□□□□ -0.4
CALD1-217ENST00000475772 PCDHB3Q9Y5E6 796 aa12.56□□□□□ -0.4
CALD1-217ENST00000475772 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
CALD1-217ENST00000475772 KBTBD13C9JR72 458 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 VWA5AO00534 786 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 SLC25A27O95847 323 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 TLE2Q04725 743 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 FUT2Q10981 343 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 SLC5A4Q9NY91 659 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 PPP1R9AQ9ULJ8 1098 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 PHF24Q9UPV7 400 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 DIS3Q9Y2L1 958 aaKnown RBP12.55□□□□□ -0.4
CALD1-217ENST00000475772 SLC4A4Q9Y6R1 1079 aa12.55□□□□□ -0.4
CALD1-217ENST00000475772 SMARCA5O60264 1052 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms