RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 OR8K1Q8NGG5 319 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 PTPN22Q9Y2R2 807 aa12.05□□□□□ -0.48
VAPB-204ENST00000475243 MRPL11Q9Y3B7 192 aaKnown RBP12.05□□□□□ -0.48
VAPB-204ENST00000475243 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 KCNQ4P56696 695 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 ANKRD20A3Q5VUR7 823 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 MIPOL1Q8TD10 442 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 PIK3CAP42336 1068 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 NEK8Q86SG6 692 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 SLFN12Q8IYM2 578 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 PRPF31Q8WWY3 499 aaKnown RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 ARMCX3Q9UH62 379 aaPredicted RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 MAST1Q9Y2H9 1570 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 SEPT6Q14141 434 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 IL17REQ8NFR9 667 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 MAGED2Q9UNF1 606 aaPredicted RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 TMEM232C9JQI7 657 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 CTNNA1P35221 906 aaKnown RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 ATP1A2P50993 1020 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 ICA1Q05084 483 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 DCPSQ96C86 337 aaKnown RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 C1orf112Q9NSG2 853 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 OR52Z1P0C646 297 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 TSTA3Q13630 321 aaPredicted RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 ADPGKQ9BRR6 497 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 RPN1P04843 607 aaKnown RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 STX2P32856 288 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 TNFAIP1Q13829 316 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 CEP120Q8N960 986 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 GJA10Q969M2 543 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 FANCLQ9NW38 375 aa12.04□□□□□ -0.48
VAPB-204ENST00000475243 SEPT9Q9UHD8 586 aaPredicted RBP12.04□□□□□ -0.48
VAPB-204ENST00000475243 SCG2P13521 617 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PDE6CP51160 858 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 YWHAEP62258 255 aaKnown RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 NUCKS1Q9H1E3 243 aaKnown RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 TSKSQ9UJT2 592 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PALM3A6NDB9 673 aaPredicted RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 ZNF445P59923 1031 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 KIAA0556O60303 1618 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 PHKG2P15735 406 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 TMOD1P28289 359 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PHKA1P46020 1223 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PPP2R5AQ15172 486 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 TSC1Q92574 1164 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 SYMPKQ92797 1274 aaKnown RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 IWS1Q96ST2 819 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 FEZ2Q9UHY8 353 aaPredicted RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 PALD1Q9ULE6 856 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 KIAA1024Q9UPX6 916 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 GSTA1P08263 222 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 GSTA2P09210 222 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PTPN21Q16825 1174 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 ADAM9Q13443 819 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PKP1Q13835 747 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 LLGL1Q15334 1064 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 ABCB5Q2M3G0 1257 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 NOP9Q86U38 636 aaKnown RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 SULF1Q8IWU6 871 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 PPP4R1Q8TF05 950 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 PLCB4Q15147 1175 aa12.03□□□□□ -0.48
VAPB-204ENST00000475243 GBP7Q8N8V2 638 aaPredicted RBP12.03□□□□□ -0.48
VAPB-204ENST00000475243 CACYBPQ9HB71 228 aaKnown RBP12.02□□□□□ -0.48
VAPB-204ENST00000475243 EFCC1Q9HA90 598 aa12.02□□□□□ -0.48
VAPB-204ENST00000475243 PARP2Q9UGN5 583 aa12.02□□□□□ -0.48
VAPB-204ENST00000475243 PCDHA1Q9Y5I3 950 aa12.02□□□□□ -0.48
VAPB-204ENST00000475243 CASQ2O14958 399 aaPredicted RBP12.02□□□□□ -0.49
VAPB-204ENST00000475243 TMEM191BP0C7N4 346 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 HADHQ16836 314 aaKnown RBP12.02□□□□□ -0.49
VAPB-204ENST00000475243 SLFN13Q68D06 897 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 RASGRP4Q8TDF6 673 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 PUS3Q9BZE2 481 aaKnown RBP12.02□□□□□ -0.49
VAPB-204ENST00000475243 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 SCRN1Q12765 414 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 LMNTD2Q8IXW0 634 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 MAIP1Q8WWC4 291 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 AKT3Q9Y243 479 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 ARHGAP42A6NI28 874 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
VAPB-204ENST00000475243 RIC8AQ9NPQ8 531 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 THAP12O43422 761 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 BAG6P46379 1132 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 ANKRD13CQ8N6S4 541 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 MYRIPQ8NFW9 859 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 TRIM58Q8NG06 486 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 FAM114A2Q9NRY5 505 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 MAD1L1Q9Y6D9 718 aa12.02□□□□□ -0.49
VAPB-204ENST00000475243 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms