RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ADGRF4Q8IZF3 695 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 ENGASEQ8NFI3 743 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 TRPM4Q8TD43 1214 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 HOOK2Q96ED9 719 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 ABHD8Q96I13 439 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 GMCL1Q96IK5 515 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 CAPNS2Q96L46 248 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 GLIS2Q9BZE0 524 aaPredicted RBP11.68□□□□□ -0.54
PCCB-213ENST00000475214 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 PCDHB6Q9Y5E3 794 aa11.68□□□□□ -0.54
PCCB-213ENST00000475214 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 ZBTB5O15062 677 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 CCDC192P0DO97 292 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCCB-213ENST00000475214 CAP2P40123 477 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 HIRAP54198 1017 aaPredicted RBP11.67□□□□□ -0.54
PCCB-213ENST00000475214 FMR1Q06787 632 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCCB-213ENST00000475214 SNW1Q13573 536 aaKnown RBP11.67□□□□□ -0.54
PCCB-213ENST00000475214 RRP1BQ14684 758 aaKnown RBP11.67□□□□□ -0.54
PCCB-213ENST00000475214 SHROOM1Q2M3G4 852 aaPredicted RBP11.67□□□□□ -0.54
PCCB-213ENST00000475214 TTBK2Q6IQ55 1244 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 SASS6Q6UVJ0 657 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 KCTD1Q719H9 257 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 MIGA2Q7L4E1 593 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 KRT25Q7Z3Z0 450 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 SAPCD2Q86UD0 394 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 FMR1NBQ8N0W7 255 aaPredicted RBP11.67□□□□□ -0.54
PCCB-213ENST00000475214 ANP32BQ92688 251 aaKnown RBP11.67□□□□□ -0.54
PCCB-213ENST00000475214 RBSNQ9H1K0 784 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 JMJD4Q9H9V9 463 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 FAM13BQ9NYF5 915 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 PCDHA6Q9UN73 950 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 PCDHA8Q9Y5H6 950 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 TRPM7Q96QT4 1865 aa11.67□□□□□ -0.54
PCCB-213ENST00000475214 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 CA12O43570 354 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 NDUFB10O96000 172 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 ASNSP08243 561 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 BMP3P12645 472 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 PFKFB1P16118 471 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 PTPREP23469 700 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 SLC16A2P36021 539 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 NDUFA8P51970 172 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 JAG1P78504 1218 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 ZNF174Q15697 407 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 EARS2Q5JPH6 523 aaKnown RBP11.66□□□□□ -0.54
PCCB-213ENST00000475214 RESP18Q5W5W9 173 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 RBM43Q6ZSC3 357 aaKnown RBP11.66□□□□□ -0.54
PCCB-213ENST00000475214 KRT26Q7Z3Y9 468 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 APOBEC3FQ8IUX4 373 aaKnown RBP11.66□□□□□ -0.54
PCCB-213ENST00000475214 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 C2orf69Q8N8R5 385 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 ZNF579Q8NAF0 562 aaKnown RBP11.66□□□□□ -0.54
PCCB-213ENST00000475214 ZNF408Q9H9D4 720 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 GINM1Q9NU53 330 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 TMX2Q9Y320 296 aa11.66□□□□□ -0.54
PCCB-213ENST00000475214 SRPRBQ9Y5M8 271 aaKnown RBP11.66□□□□□ -0.54
PCCB-213ENST00000475214 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 USP17L10C9JJH3 530 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 M0R2N6 131 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 ZNF202O95125 648 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 EGFRP00533 1210 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 SYKP43405 635 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 ADCY7P51828 1080 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 IKQ13123 557 aaPredicted RBP11.65□□□□□ -0.54
PCCB-213ENST00000475214 GRM1Q13255 1194 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 NONOQ15233 471 aaKnown RBP eCLIP11.65□□□□□ -0.54
PCCB-213ENST00000475214 DCAF15Q66K64 600 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 CYP4F22Q6NT55 531 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 SHC4Q6S5L8 630 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 CDAN1Q8IWY9 1227 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 FERMT2Q96AC1 680 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 COA7Q96BR5 231 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 MTMR8Q96EF0 704 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 TIGD1Q96MW7 591 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 CLIC6Q96NY7 704 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 SDF4Q9BRK5 362 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 GLT8D2Q9H1C3 349 aa11.65□□□□□ -0.54
PCCB-213ENST00000475214 FBXO2Q9UK22 296 aaPredicted RBP11.65□□□□□ -0.54
PCCB-213ENST00000475214 A0A1W2PRG0 241 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 TMEM232C9JQI7 657 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 MRPL12P52815 198 aaKnown RBP11.64□□□□□ -0.55
PCCB-213ENST00000475214 TRAF1Q13077 416 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 NOGQ13253 232 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 CDC37Q16543 378 aaPredicted RBP11.64□□□□□ -0.55
PCCB-213ENST00000475214 NOM1Q5C9Z4 860 aaKnown RBP11.64□□□□□ -0.55
PCCB-213ENST00000475214 SYDE2Q5VT97 1194 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 BTNL9Q6UXG8 535 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 CKAP2LQ8IYA6 745 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 REXO1Q8N1G1 1221 aaKnown RBP11.64□□□□□ -0.55
PCCB-213ENST00000475214 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 TEPSINQ96N21 525 aa11.64□□□□□ -0.55
PCCB-213ENST00000475214 FUCA2Q9BTY2 467 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms