RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDPN-204ENST00000475043 HIP1O00291 1037 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 EVI5O60447 810 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 NMT2O60551 498 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 ZBED4O75132 1171 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 COPB2P35606 906 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 KCTD2Q14681 263 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 SNRNP48Q6IEG0 339 aaKnown RBP11.15□□□□□ -0.62
PDPN-204ENST00000475043 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 TEX13BQ9BXU2 312 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 NBPF3Q9H094 633 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 FEM1BQ9UK73 627 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 OGDHLQ9ULD0 1010 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 NR2E3Q9Y5X4 410 aa11.15□□□□□ -0.62
PDPN-204ENST00000475043 ALPK3Q96L96 1907 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 TMEM232C9JQI7 657 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 ORC4O43929 436 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 PGK2P07205 417 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 MCCP23508 829 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 SLC1A4P43007 532 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 STAT2P52630 851 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 OLFML2BQ68BL8 750 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 REPS2Q8NFH8 660 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 MAML3Q96JK9 1138 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 C11orf49Q9H6J7 331 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 RAVER2Q9HCJ3 691 aaKnown RBP11.14□□□□□ -0.63
PDPN-204ENST00000475043 IL17RBQ9NRM6 502 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
PDPN-204ENST00000475043 TACC3Q9Y6A5 838 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 LAMA4Q16363 1823 aa11.14□□□□□ -0.63
PDPN-204ENST00000475043 ZMYM6O95789 1325 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 ZNF213O14771 459 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 MSCO60682 206 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 PDE4AP27815 886 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 KCTD1Q719H9 257 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 CHURC1Q8WUH1 139 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 DDX11Q96FC9 970 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 GMCL1Q96IK5 515 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 RIPK3Q9Y572 518 aa11.13□□□□□ -0.63
PDPN-204ENST00000475043 FGRP09769 529 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 CYBAP13498 195 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 PRAMEF19Q5SWL8 479 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 AKNAD1Q5T1N1 836 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 ANO1Q5XXA6 986 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 RASGRP2Q7LDG7 609 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 FAM160B2Q86V87 743 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 SPNS2Q8IVW8 549 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 ANKRD35Q8N283 1001 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 TRPV1Q8NER1 839 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 STAG1Q8WVM7 1258 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 KRTAP3-3Q9BYR6 98 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 RNF41Q9H4P4 317 aaPredicted RBP11.12□□□□□ -0.63
PDPN-204ENST00000475043 HOMER2Q9NSB8 354 aa11.12□□□□□ -0.63
PDPN-204ENST00000475043 ATP2A1O14983 1001 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 FDX1P10109 184 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 HABP4Q5JVS0 413 aaKnown RBP11.11□□□□□ -0.63
PDPN-204ENST00000475043 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 RCSD1Q6JBY9 416 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 GPR153Q6NV75 609 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 TBC1D10CQ8IV04 446 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 C7orf61Q8IZ16 206 aa11.11□□□□□ -0.63
PDPN-204ENST00000475043 DIS3Q9Y2L1 958 aaKnown RBP11.11□□□□□ -0.63
PDPN-204ENST00000475043 PFASO15067 1338 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 SEPT4O43236 478 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 IGHA2P01877 340 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 TOP1P11387 765 aaKnown RBP11.1□□□□□ -0.63
PDPN-204ENST00000475043 PCP11498 1178 aaKnown RBP11.1□□□□□ -0.63
PDPN-204ENST00000475043 GSPT1P15170 499 aaKnown RBP11.1□□□□□ -0.63
PDPN-204ENST00000475043 OAZ1P54368 228 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 SNAP25P60880 206 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 IMMTQ16891 758 aaKnown RBP11.1□□□□□ -0.63
PDPN-204ENST00000475043 ZNF792Q3KQV3 632 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 CCDC174Q6PII3 467 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 ESR2Q92731 530 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 TMEM47Q9BQJ4 181 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 TINF2Q9BSI4 451 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 DSCC1Q9BVC3 393 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 SENP6Q9GZR1 1112 aaPredicted RBP11.1□□□□□ -0.63
PDPN-204ENST00000475043 TCP11L1Q9NUJ3 509 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 FBXO40Q9UH90 709 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 PRR12Q9ULL5 1215 aa11.1□□□□□ -0.63
PDPN-204ENST00000475043 NEDD4P46934 1319 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
PDPN-204ENST00000475043 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 KDM4AO75164 1064 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 ALAS1P13196 640 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 SLC16A2P36021 539 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 NOVP48745 357 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 GJC2Q5T442 439 aaPredicted RBP11.09□□□□□ -0.63
PDPN-204ENST00000475043 ARRDC4Q8NCT1 418 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 AGBL1Q96MI9 1066 aa11.09□□□□□ -0.63
PDPN-204ENST00000475043 GPCPD1Q9NPB8 672 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms