RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 DCAF4Q8WV16 495 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 FEZ1Q99689 392 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 ELP3Q9H9T3 547 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 GINM1Q9NU53 330 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 CFAP45Q9UL16 551 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 STK36Q9NRP7 1315 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 TRPM7Q96QT4 1865 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 ITGBL1O95965 494 aaPredicted RBP23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 FAM83BQ5T0W9 1011 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 LUZP1Q86V48 1076 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 PDCL2Q8N4E4 241 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 GOPCQ9HD26 462 aa23.77■■□□□ 1.4
SMIM11A-204ENST00000474455 CTAGE5O15320 804 aa23.76■■□□□ 1.39
SMIM11A-204ENST00000474455 GNAQP50148 359 aa23.76■■□□□ 1.39
SMIM11A-204ENST00000474455 RESTQ13127 1097 aa23.76■■□□□ 1.39
SMIM11A-204ENST00000474455 GMCL1Q96IK5 515 aa23.76■■□□□ 1.39
SMIM11A-204ENST00000474455 GPBP1L1Q9HC44 474 aaPredicted RBP23.76■■□□□ 1.39
SMIM11A-204ENST00000474455 EMILIN3Q9NT22 766 aa23.76■■□□□ 1.39
SMIM11A-204ENST00000474455 SMTNL1A8MU46 457 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 USP17L10C9JJH3 530 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 DEXIO95424 95 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 BMP3P12645 472 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 DMTNQ08495 405 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 CAMK4Q16566 473 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 HOMER1Q86YM7 354 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 ADGRF4Q8IZF3 695 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 ZNF280CQ8ND82 737 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 RIOX1Q9H6W3 641 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 AFG3L2Q9Y4W6 797 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 CSADQ9Y600 493 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 TMEM232C9JQI7 657 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 NEMFO60524 1076 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 SNAP25P60880 206 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 GPATCH4Q5T3I0 446 aaKnown RBP23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 CCDC186Q7Z3E2 898 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 C8orf76Q96K31 380 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 PIGSQ96S52 555 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 WDR18Q9BV38 432 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 SPZ1Q9BXG8 430 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 GTPBP4Q9BZE4 634 aaKnown RBP23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 PAXBP1Q9Y5B6 917 aa23.75■■□□□ 1.39
SMIM11A-204ENST00000474455 CELF2O95319 508 aaKnown RBP23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 AKAP17AQ02040 695 aaKnown RBP23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 CHADLQ6NUI6 762 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 SARM1Q6SZW1 724 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 DRC7Q8IY82 874 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 ANKRD13AQ8IZ07 590 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 GPKOWQ92917 476 aaPredicted RBP eCLIP23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 TRIM5Q9C035 493 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 KIAA1683Q9H0B3 1180 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 JMJD4Q9H9V9 463 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 VPS54Q9P1Q0 977 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 KCNJ14Q9UNX9 436 aa23.74■■□□□ 1.39
SMIM11A-204ENST00000474455 H3BQV1 296 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 BACE1P56817 501 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 IFFO2Q5TF58 517 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 CST9Q5W186 159 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 ATL3Q6DD88 541 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 ARMC9Q7Z3E5 817 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 CKAP2LQ8IYA6 745 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 TSC1Q92574 1164 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 LZTS2Q9BRK4 669 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 SYNPO2Q9UMS6 1093 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 PARP14Q460N5 1801 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 KIF3CO14782 793 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 ZNF165P49910 485 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 HMGCS2P54868 508 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 FAM173BQ6P4H8 233 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 FBXO18Q8NFZ0 1043 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 BICD2Q8TD16 824 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 SH2D4AQ9H788 454 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 AS3MTQ9HBK9 375 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 FBXO28Q9NVF7 368 aa23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 TFIP11Q9UBB9 837 aaKnown RBP23.73■■□□□ 1.39
SMIM11A-204ENST00000474455 PFKFB3Q16875 520 aaPredicted RBP23.72■■□□□ 1.39
SMIM11A-204ENST00000474455 LDLRAD1Q5T700 205 aa23.72■■□□□ 1.39
SMIM11A-204ENST00000474455 KRT40Q6A162 431 aa23.72■■□□□ 1.39
SMIM11A-204ENST00000474455 SAMD1Q6SPF0 538 aaPredicted RBP23.72■■□□□ 1.39
SMIM11A-204ENST00000474455 OTUD5Q96G74 571 aa23.72■■□□□ 1.39
SMIM11A-204ENST00000474455 PGBD1Q96JS3 809 aa23.72■■□□□ 1.39
SMIM11A-204ENST00000474455 ADAMTS3O15072 1205 aa23.71■■□□□ 1.39
SMIM11A-204ENST00000474455 SCG2P13521 617 aa23.71■■□□□ 1.39
SMIM11A-204ENST00000474455 IKQ13123 557 aaPredicted RBP23.71■■□□□ 1.39
SMIM11A-204ENST00000474455 TYW1BQ6NUM6 668 aa23.71■■□□□ 1.39
SMIM11A-204ENST00000474455 IRF6O14896 467 aa23.7■■□□□ 1.39
SMIM11A-204ENST00000474455 GBA2Q9HCG7 927 aaPredicted RBP23.7■■□□□ 1.39
SMIM11A-204ENST00000474455 RLFQ13129 1914 aa23.7■■□□□ 1.39
SMIM11A-204ENST00000474455 MYH15Q9Y2K3 1946 aa23.7■■□□□ 1.39
SMIM11A-204ENST00000474455 NR1I2O75469 434 aa23.7■■□□□ 1.38
SMIM11A-204ENST00000474455 VCAM1P19320 739 aa23.7■■□□□ 1.38
SMIM11A-204ENST00000474455 SMARCA1P28370 1054 aa23.7■■□□□ 1.38
SMIM11A-204ENST00000474455 WWC2Q6AWC2 1192 aa23.7■■□□□ 1.38
SMIM11A-204ENST00000474455 MRFAP1L1Q96HT8 127 aa23.7■■□□□ 1.38
SMIM11A-204ENST00000474455 PPP1R11O60927 126 aaPredicted RBP23.69■■□□□ 1.38
SMIM11A-204ENST00000474455 TAL1P17542 331 aaPredicted RBP23.69■■□□□ 1.38
SMIM11A-204ENST00000474455 GJA5P36382 358 aa23.69■■□□□ 1.38
SMIM11A-204ENST00000474455 WASF1Q92558 559 aa23.69■■□□□ 1.38
SMIM11A-204ENST00000474455 RRP36Q96EU6 259 aaKnown RBP23.69■■□□□ 1.38
SMIM11A-204ENST00000474455 KIF28PB7ZC32 967 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms