RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 ADAMTSL1Q8N6G6 1762 aa9.07□□□□□ -0.96
VPS50-211ENST00000474412 DHX15O43143 795 aaKnown RBP9.07□□□□□ -0.96
VPS50-211ENST00000474412 GAS2O43903 313 aaKnown RBP9.07□□□□□ -0.96
VPS50-211ENST00000474412 C1QTNF8P60827 252 aa9.07□□□□□ -0.96
VPS50-211ENST00000474412 RPS26P11Q5JNZ5 115 aaPredicted RBP9.07□□□□□ -0.96
VPS50-211ENST00000474412 C9orf131Q5VYM1 1079 aa9.07□□□□□ -0.96
VPS50-211ENST00000474412 ALG1LQ6GMV1 187 aa9.07□□□□□ -0.96
VPS50-211ENST00000474412 FAM46AQ96IP4 442 aaKnown RBP9.07□□□□□ -0.96
VPS50-211ENST00000474412 CYP4F12Q9HCS2 524 aa9.07□□□□□ -0.96
VPS50-211ENST00000474412 MAP3K15Q6ZN16 1313 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 RIC1Q4ADV7 1423 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 EIF2S2P20042 333 aaKnown RBP9.06□□□□□ -0.96
VPS50-211ENST00000474412 GPTP24298 496 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 MAOBP27338 520 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 PREPP48147 710 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 POU4F3Q15319 338 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 HP1BP3Q5SSJ5 553 aaPredicted RBP9.06□□□□□ -0.96
VPS50-211ENST00000474412 NXPE4Q6UWF7 544 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
VPS50-211ENST00000474412 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 SETDB2Q96T68 719 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 ZFYVE1Q9HBF4 777 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 NMRK2Q9NPI5 230 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 RNF181Q9P0P0 153 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 GPN3Q9UHW5 284 aaPredicted RBP9.06□□□□□ -0.96
VPS50-211ENST00000474412 NIP7Q9Y221 180 aaKnown RBP eCLIP9.06□□□□□ -0.96
VPS50-211ENST00000474412 RAXQ9Y2V3 346 aa9.06□□□□□ -0.96
VPS50-211ENST00000474412 LAS1LQ9Y4W2 734 aaKnown RBP9.06□□□□□ -0.96
VPS50-211ENST00000474412 APAF1O14727 1248 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 P4HBP07237 508 aaKnown RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 XRCC5P13010 732 aaKnown RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 ZNF157P51786 506 aaPredicted RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 LMOD3Q0VAK6 560 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 EXOSC6Q5RKV6 272 aaKnown RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 OLFM4Q6UX06 510 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 NPM2Q86SE8 214 aaKnown RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 NBPF5PQ86XG9 351 aaPredicted RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 ARMC10Q8N2F6 343 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 C12orf50Q8NA57 414 aaPredicted RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS50-211ENST00000474412 TMPRSS13Q9BYE2 586 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 PNNQ9H307 717 aaKnown RBP9.05□□□□□ -0.96
VPS50-211ENST00000474412 STOML1Q9UBI4 398 aa9.05□□□□□ -0.96
VPS50-211ENST00000474412 SCN9AQ15858 1988 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 IBTKQ9P2D0 1353 aaPredicted RBP9.04□□□□□ -0.96
VPS50-211ENST00000474412 H0YIN7 160 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 NPHP1O15259 732 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 DLGAP3O95886 979 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 SRGNP10124 158 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 ST5P78524 1137 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 TTLL6Q8N841 843 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 MYRFLQ96LU7 910 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 TRIM56Q9BRZ2 755 aaKnown RBP9.04□□□□□ -0.96
VPS50-211ENST00000474412 BRIP1Q9BX63 1249 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 CHPF2Q9P2E5 772 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 ZNF652Q9Y2D9 606 aa9.04□□□□□ -0.96
VPS50-211ENST00000474412 TRPM7Q96QT4 1865 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 CHL1O00533 1208 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 NTSR2O95665 410 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 LDHBP07195 334 aaKnown RBP9.03□□□□□ -0.96
VPS50-211ENST00000474412 PDE6BP35913 854 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 ZEB1P37275 1124 aaPredicted RBP9.03□□□□□ -0.96
VPS50-211ENST00000474412 FAAP100Q0VG06 881 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 AP3B2Q13367 1082 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 ZMYM1Q5SVZ6 1142 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 CLEC4GQ6UXB4 293 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 KIF6Q6ZMV9 814 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.03□□□□□ -0.96
VPS50-211ENST00000474412 SMG8Q8ND04 991 aaKnown RBP9.03□□□□□ -0.96
VPS50-211ENST00000474412 KCNF1Q9H3M0 494 aa9.03□□□□□ -0.96
VPS50-211ENST00000474412 ANKRD33BA6NCL7 494 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 BMP3P12645 472 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 FSTP19883 344 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 PPP2R3AQ06190 1150 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 AIMP1Q12904 312 aaKnown RBP9.02□□□□□ -0.97
VPS50-211ENST00000474412 PDE3AQ14432 1141 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 ZNF34Q8IZ26 560 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 SUGCTQ9HAC7 445 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 RAD18Q9NS91 495 aa9.02□□□□□ -0.97
VPS50-211ENST00000474412 ERVV-1B6SEH8 477 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 CTSBP07858 339 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 ZNF853P0CG23 659 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 STYK1Q6J9G0 422 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 FAM20CQ8IXL6 584 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 TSR2Q969E8 191 aaKnown RBP9.01□□□□□ -0.97
VPS50-211ENST00000474412 TMEM39AQ9NV64 488 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 HIF3AQ9Y2N7 669 aa9.01□□□□□ -0.97
VPS50-211ENST00000474412 KLRG2A4D1S0 409 aaPredicted RBP9□□□□□ -0.97
VPS50-211ENST00000474412 GIPC1O14908 333 aa9□□□□□ -0.97
VPS50-211ENST00000474412 TIAF1O95411 115 aa9□□□□□ -0.97
VPS50-211ENST00000474412 ECEL1O95672 775 aa9□□□□□ -0.97
VPS50-211ENST00000474412 DRD2P14416 443 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms