RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 MYH9P35579 1960 aaKnown RBP9.63□□□□□ -0.87
CNN3-205ENST00000474409 LOXHD1Q8IVV2 1947 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 PNMA6FA0A0J9YX94 578 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 VPS37CA5D8V6 355 aaPredicted RBP9.62□□□□□ -0.87
CNN3-205ENST00000474409 RASSF10A6NK89 507 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 SPDYE16A6NNV3 312 aaPredicted RBP9.62□□□□□ -0.87
CNN3-205ENST00000474409 FDPSP14324 419 aaKnown RBP9.62□□□□□ -0.87
CNN3-205ENST00000474409 SNAP25P60880 206 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 SREBF2Q12772 1141 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 COG2Q14746 738 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 SLC35G1Q2M3R5 365 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 DEFB115Q30KQ5 88 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 USH1GQ495M9 461 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 LARP1BQ659C4 914 aaKnown RBP9.62□□□□□ -0.87
CNN3-205ENST00000474409 WWC2Q6AWC2 1192 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 CYP4F22Q6NT55 531 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 SMCR8Q8TEV9 937 aaPredicted RBP9.62□□□□□ -0.87
CNN3-205ENST00000474409 CCDC12Q8WUD4 166 aaPredicted RBP9.62□□□□□ -0.87
CNN3-205ENST00000474409 BRI3BPQ8WY22 251 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 ATG4CQ96DT6 458 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 MS4A4AQ96JQ5 239 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 CAPNS2Q96L46 248 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 AIFM3Q96NN9 605 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 AMNQ9BXJ7 453 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 VPS54Q9P1Q0 977 aa9.62□□□□□ -0.87
CNN3-205ENST00000474409 FAM155AB1AL88 458 aaPredicted RBP9.61□□□□□ -0.87
CNN3-205ENST00000474409 BTBD19C9JJ37 291 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 PDHXO00330 501 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 STX6O43752 255 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 ZBED4O75132 1171 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 FDX1P10109 184 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 HOXA7P31268 230 aaPredicted RBP9.61□□□□□ -0.87
CNN3-205ENST00000474409 DSG3P32926 999 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 NAPAP54920 295 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 MOGSQ13724 837 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 GNL2Q13823 731 aaKnown RBP9.61□□□□□ -0.87
CNN3-205ENST00000474409 PKN1Q16512 942 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 GPAT2Q6NUI2 795 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 PPP1R18Q6NYC8 613 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 ANKRD23Q86SG2 305 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 FBXO11Q86XK2 927 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 GTF3C2Q8WUA4 911 aaPredicted RBP9.61□□□□□ -0.87
CNN3-205ENST00000474409 MTMR8Q96EF0 704 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 PARK7Q99497 189 aaKnown RBP9.61□□□□□ -0.87
CNN3-205ENST00000474409 ASCC2Q9H1I8 757 aaPredicted RBP9.61□□□□□ -0.87
CNN3-205ENST00000474409 SLC38A10Q9HBR0 1119 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 BRMS1Q9HCU9 246 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 HOXC10Q9NYD6 342 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 CCPG1Q9ULG6 757 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 SLC45A1Q9Y2W3 748 aa9.61□□□□□ -0.87
CNN3-205ENST00000474409 ABCB11O95342 1321 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 STXBP3O00186 592 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 VWA5AO00534 786 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 ICAM1P05362 532 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 SYT1P21579 422 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 HERVK_113P62684 666 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 GUCY1B3Q02153 619 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 TRAF1Q13077 416 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 NOGQ13253 232 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 PLS1Q14651 629 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 SAFBQ15424 915 aaKnown RBP eCLIP9.6□□□□□ -0.87
CNN3-205ENST00000474409 TAF1CQ15572 869 aaPredicted RBP9.6□□□□□ -0.87
CNN3-205ENST00000474409 KRT40Q6A162 431 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 OTUD7BQ6GQQ9 843 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 FAM43AQ8N2R8 423 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 MB21D1Q8N884 522 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 COA7Q96BR5 231 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 PAGR1Q9BTK6 254 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 RAVER2Q9HCJ3 691 aaKnown RBP9.6□□□□□ -0.87
CNN3-205ENST00000474409 SH3GLB2Q9NR46 395 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 BARHL2Q9NY43 387 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 PNMA2Q9UL42 364 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 PCDHA1Q9Y5I3 950 aa9.6□□□□□ -0.87
CNN3-205ENST00000474409 WDR33Q9C0J8 1336 aaKnown RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 FRMPD3Q5JV73 1810 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 IGF2BP3O00425 579 aaKnown RBP eCLIP9.59□□□□□ -0.87
CNN3-205ENST00000474409 PPP1R11O60927 126 aaPredicted RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 MMP1P03956 469 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 CYP2C8P10632 490 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 ALAS1P13196 640 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 PDIA4P13667 645 aaKnown RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 TAL1P17542 331 aaPredicted RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 CALML3P27482 149 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 ADCY7P51828 1080 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 OAZ1P54368 228 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 INHBEP58166 350 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 NLRP5P59047 1200 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 NUCB2P80303 420 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 MCTP1Q6DN14 999 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 SNRNP48Q6IEG0 339 aaKnown RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 P2RX7Q99572 595 aaKnown RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 TEX13BQ9BXU2 312 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 ZCCHC17Q9NP64 241 aaKnown RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 HOMER2Q9NSB8 354 aa9.59□□□□□ -0.87
CNN3-205ENST00000474409 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
CNN3-205ENST00000474409 KCNJ14Q9UNX9 436 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms