RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 HERVK_113P62684 666 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 PDCLQ13371 301 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 TTF1Q15361 905 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 TSR1Q2NL82 804 aaKnown RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 TTMPQ5BVD1 217 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 EMC10Q5UCC4 262 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 BICDL1Q6ZP65 573 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 USP49Q70CQ1 688 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 FAM217BQ9NTX9 383 aaPredicted RBP16.23■□□□□ 0.19
SAMM50-203ENST00000474323 PCDHB6Q9Y5E3 794 aa16.23■□□□□ 0.19
SAMM50-203ENST00000474323 GOLGA8AA7E2F4 631 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 RASSF9O75901 435 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 NTSR2O95665 410 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 ACTN3Q08043 901 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 DRP2Q13474 957 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 CYB5R4Q7L1T6 521 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 ZNF572Q7Z3I7 529 aaPredicted RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 DNAJC7Q99615 494 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 MTMR7Q9Y216 660 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 TCP11X2Q5H9J9 407 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 SGMS1Q86VZ5 419 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 AMIGO3Q86WK7 504 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 CEP120Q8N960 986 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 ARL8AQ96BM9 186 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 CNNM1Q9NRU3 951 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 RWDD2AQ9UIY3 292 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 CTNND2Q9UQB3 1225 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 LUC7L2Q9Y383 392 aaKnown RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
SAMM50-203ENST00000474323 MYO5AQ9Y4I1 1855 aaKnown RBP16.22■□□□□ 0.19
SAMM50-203ENST00000474323 ECM29Q5VYK3 1845 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 LY75O60449 1722 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 RPS6KA4O75676 772 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 C2orf54Q08AI8 447 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 CCDC40Q4G0X9 1142 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 RC3H1Q5TC82 1133 aaKnown RBP16.21■□□□□ 0.19
SAMM50-203ENST00000474323 SMYD4Q8IYR2 804 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-203ENST00000474323 CAVIN3Q969G5 261 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 PUS7LQ9H0K6 701 aaKnown RBP16.21■□□□□ 0.19
SAMM50-203ENST00000474323 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 TTC26A0AVF1 554 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 PPP1R12AO14974 1030 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-203ENST00000474323 ZNF185O15231 689 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 SCP2P22307 547 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 LSP1P33241 339 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 MRPL12P52815 198 aaKnown RBP16.21■□□□□ 0.19
SAMM50-203ENST00000474323 METTL24Q5JXM2 366 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 NAA35Q5VZE5 725 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 KDM7AQ6ZMT4 941 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 KCTD17Q8N5Z5 321 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 IGDCC4Q8TDY8 1250 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 N4BP2L2Q92802 583 aaPredicted RBP16.21■□□□□ 0.19
SAMM50-203ENST00000474323 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 TAB2Q9NYJ8 693 aa16.21■□□□□ 0.19
SAMM50-203ENST00000474323 TAF1LQ8IZX4 1826 aa16.21■□□□□ 0.18
SAMM50-203ENST00000474323 SRRM3A6NNA2 597 aaPredicted RBP16.2■□□□□ 0.18
SAMM50-203ENST00000474323 KCNJ18B7U540 433 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 GPAA1O43292 621 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 IDEP14735 1019 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 GCFC2P16383 781 aaKnown RBP16.2■□□□□ 0.18
SAMM50-203ENST00000474323 IFNAR1P17181 557 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 APBA1Q02410 837 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 UBXN1Q04323 297 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 NNTQ13423 1086 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 KCNJ12Q14500 433 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 FAM212AQ96EL1 285 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 RIPOR2Q9Y4F9 1068 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 RIC1Q4ADV7 1423 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 A0A087X0B3 334 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 ERCC3P19447 782 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 TNFRSF8P28908 595 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 ADORA1P30542 326 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 CYLC1P35663 651 aaPredicted RBP16.2■□□□□ 0.18
SAMM50-203ENST00000474323 CDR1P51861 262 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 KRT27Q7Z3Y8 459 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 IQCA1Q86XH1 822 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 CCDC50Q8IVM0 306 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 PURBQ96QR8 312 aaKnown RBP16.2■□□□□ 0.18
SAMM50-203ENST00000474323 DMGDHQ9UI17 866 aaKnown RBP16.2■□□□□ 0.18
SAMM50-203ENST00000474323 CAPN11Q9UMQ6 739 aa16.2■□□□□ 0.18
SAMM50-203ENST00000474323 RTCBQ9Y3I0 505 aaKnown RBP16.2■□□□□ 0.18
SAMM50-203ENST00000474323 A0A1W2PQC6 194 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 PRLRP16471 622 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 LIFRP42702 1097 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 CRYMQ14894 314 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 CEP85LQ5SZL2 805 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 WDR59Q6PJI9 974 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 CREG2Q8IUH2 290 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 CCDC13Q8IYE1 715 aa16.19■□□□□ 0.18
SAMM50-203ENST00000474323 MAGEC3Q8TD91 643 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms