RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 PHF24Q9UPV7 400 aa19.23■□□□□ 0.67
CPA4-205ENST00000474254 POTEB2H3BUK9 544 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 RRP12Q5JTH9 1297 aaKnown RBP19.22■□□□□ 0.67
CPA4-205ENST00000474254 AKNAD1Q5T1N1 836 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 C1orf53Q5VUE5 145 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 SNRNP48Q6IEG0 339 aaKnown RBP19.22■□□□□ 0.67
CPA4-205ENST00000474254 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 KIFC2Q96AC6 838 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 DDX11Q96FC9 970 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 FAM161BQ96MY7 647 aa19.22■□□□□ 0.67
CPA4-205ENST00000474254 MYH6P13533 1939 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 PGK1P00558 417 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 SLC1A4P43007 532 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 SLC4A3P48751 1232 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 STAT2P52630 851 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 SHHQ15465 462 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 DSCC1Q9BVC3 393 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 LCTP09848 1927 aa19.21■□□□□ 0.67
CPA4-205ENST00000474254 TMEM232C9JQI7 657 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 ZBED4O75132 1171 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 CLTBP09497 229 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 FDX1P10109 184 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 TAL1P17542 331 aaPredicted RBP19.2■□□□□ 0.66
CPA4-205ENST00000474254 OAZ1P54368 228 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 TLE2Q04725 743 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 MFSD6Q6ZSS7 791 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.2■□□□□ 0.66
CPA4-205ENST00000474254 RASGRP2Q7LDG7 609 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 FAM160B2Q86V87 743 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 MSL3Q8N5Y2 521 aaKnown RBP19.2■□□□□ 0.66
CPA4-205ENST00000474254 GUCD1Q96NT3 240 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 IL25Q9H293 177 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 RNF41Q9H4P4 317 aaPredicted RBP19.2■□□□□ 0.66
CPA4-205ENST00000474254 TCP11L1Q9NUJ3 509 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 RIPK3Q9Y572 518 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 NEDD4P46934 1319 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 RAD50Q92878 1312 aa19.2■□□□□ 0.66
CPA4-205ENST00000474254 A0A1W2PQ45 241 aaPredicted RBP19.19■□□□□ 0.66
CPA4-205ENST00000474254 A0A1W2PQY0 241 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 PLA2G6O60733 806 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 ZNF865P0CJ78 1059 aaPredicted RBP19.19■□□□□ 0.66
CPA4-205ENST00000474254 MCCP23508 829 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 C9orf50Q5SZB4 431 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 SH3RF1Q7Z6J0 888 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 CPXCR1Q8N123 301 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 CHURC1Q8WUH1 139 aa19.19■□□□□ 0.66
CPA4-205ENST00000474254 ZHX1Q9UKY1 873 aaPredicted RBP19.19■□□□□ 0.66
CPA4-205ENST00000474254 ISY1Q9ULR0 285 aaKnown RBP19.19■□□□□ 0.66
CPA4-205ENST00000474254 LAMA2P24043 3122 aaKnown RBP19.19■□□□□ 0.66
CPA4-205ENST00000474254 LRRC37A2A6NM11 1700 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 TRIM43BA6NCK2 446 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 ZNF213O14771 459 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 PQBP1O60828 265 aaKnown RBP19.18■□□□□ 0.66
CPA4-205ENST00000474254 NT5C2P49902 561 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 RCSD1Q6JBY9 416 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 DCAF4Q8WV16 495 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 TRIM43Q96BQ3 446 aaPredicted RBP19.18■□□□□ 0.66
CPA4-205ENST00000474254 LENG1Q96BZ8 264 aaPredicted RBP19.18■□□□□ 0.66
CPA4-205ENST00000474254 RAVER2Q9HCJ3 691 aaKnown RBP19.18■□□□□ 0.66
CPA4-205ENST00000474254 FAM184BQ9ULE4 1060 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
CPA4-205ENST00000474254 TOP1P11387 765 aaKnown RBP19.17■□□□□ 0.66
CPA4-205ENST00000474254 RAG1P15918 1043 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 IKQ13123 557 aaPredicted RBP19.17■□□□□ 0.66
CPA4-205ENST00000474254 KCTD1Q719H9 257 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 NUP133Q8WUM0 1156 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 ESR2Q92731 530 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 CHMP4CQ96CF2 233 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 TMEM47Q9BQJ4 181 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 TSEN34Q9BSV6 310 aaKnown RBP19.17■□□□□ 0.66
CPA4-205ENST00000474254 STARD7Q9NQZ5 370 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
CPA4-205ENST00000474254 A0A0C4DFX4 3053 aa19.16■□□□□ 0.66
CPA4-205ENST00000474254 ADAMTS4O75173 837 aa19.16■□□□□ 0.66
CPA4-205ENST00000474254 ANKRD35Q8N283 1001 aa19.16■□□□□ 0.66
CPA4-205ENST00000474254 TMEM39AQ9NV64 488 aa19.16■□□□□ 0.66
CPA4-205ENST00000474254 ZNF536O15090 1300 aa19.16■□□□□ 0.66
CPA4-205ENST00000474254 SYNRGQ9UMZ2 1314 aa19.16■□□□□ 0.66
CPA4-205ENST00000474254 DNAJC25-GNG10A0A024R161 153 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 MOXD2PA6NHM9 499 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 DCDC2CA8MYV0 355 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 ACLYP53396 1101 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 SMAD3P84022 425 aaKnown RBP19.15■□□□□ 0.66
CPA4-205ENST00000474254 IMMTQ16891 758 aaKnown RBP19.15■□□□□ 0.66
CPA4-205ENST00000474254 CCDC96Q2M329 555 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 MAMDC4Q6UXC1 1216 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 ZNF467Q7Z7K2 595 aaPredicted RBP19.15■□□□□ 0.66
CPA4-205ENST00000474254 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.15■□□□□ 0.66
CPA4-205ENST00000474254 CHST13Q8NET6 341 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 RNPC3Q96LT9 517 aaKnown RBP19.15■□□□□ 0.66
CPA4-205ENST00000474254 TTC14Q96N46 770 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 SPC25Q9HBM1 224 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 CTNNA3Q9UI47 895 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 PRR12Q9ULL5 1215 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 MTMR7Q9Y216 660 aa19.15■□□□□ 0.66
CPA4-205ENST00000474254 KIAA0355O15063 1070 aa19.14■□□□□ 0.65
CPA4-205ENST00000474254 SNAI1O95863 264 aaPredicted RBP19.14■□□□□ 0.65
CPA4-205ENST00000474254 CHMLP26374 656 aa19.14■□□□□ 0.65
CPA4-205ENST00000474254 FPGSQ05932 587 aa19.14■□□□□ 0.65
CPA4-205ENST00000474254 DUSP11O75319 330 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms