RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 RASSF10A6NK89 507 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 ATP8B1O43520 1251 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 GOLGA8HP0CJ92 632 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 KIF4BQ2VIQ3 1234 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 BEND6Q5SZJ8 279 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 SPATA31A5Q5VU36 1347 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 NCAPH2Q6IBW4 605 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 SPATA31A7Q8IWB4 1347 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 ZNF507Q8TCN5 953 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 CDCA7Q9BWT1 371 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 CALCOCO1Q9P1Z2 691 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 THRAP3Q9Y2W1 955 aaKnown RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 COL24A1Q17RW2 1714 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 FLT1P17948 1338 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 KLK7P49862 253 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 GPR101Q96P66 508 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 KAT14Q9H8E8 782 aa12.32□□□□□ -0.44
C9orf3-214ENST00000473778 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
C9orf3-214ENST00000473778 TULP2O00295 520 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 VSNL1P62760 191 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 GRM4Q14833 912 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 MSANTD4Q8NCY6 345 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 KBTBD4Q9NVX7 518 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 HDAC6Q9UBN7 1215 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 RAB21Q9UL25 225 aa12.31□□□□□ -0.44
C9orf3-214ENST00000473778 STXBP3O00186 592 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 ENC1O14682 589 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 NDUFA10O95299 355 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 KIF5BP33176 963 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 HERVK_113P62684 666 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 TTI2Q6NXR4 508 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 DGKHQ86XP1 1220 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 AGPAT5Q9NUQ2 364 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 N4BP1O75113 896 aaKnown RBP12.3□□□□□ -0.44
C9orf3-214ENST00000473778 CAPN2P17655 700 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 CALML3P27482 149 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 DTHD1Q6ZMT9 781 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
C9orf3-214ENST00000473778 HPS3Q969F9 1004 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-214ENST00000473778 DUSP9Q99956 384 aaKnown RBP12.3□□□□□ -0.44
C9orf3-214ENST00000473778 TSPYL1Q9H0U9 437 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 ABCB6Q9NP58 842 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 SH3GLB2Q9NR46 395 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 GUCA1BQ9UMX6 200 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 EPN1Q9Y6I3 576 aaPredicted RBP12.3□□□□□ -0.44
C9orf3-214ENST00000473778 NAV1Q8NEY1 1877 aa12.3□□□□□ -0.44
C9orf3-214ENST00000473778 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 B4DLN1 442 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 H7C1D1 291 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 USP5P45974 858 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 SPAG1Q07617 926 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 NFIXQ14938 502 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 NBPF5PQ86XG9 351 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-214ENST00000473778 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 GIMAP8Q8ND71 665 aaPredicted RBP12.29□□□□□ -0.44
C9orf3-214ENST00000473778 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 TTYH3Q9C0H2 523 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 RMND1Q9NWS8 449 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 BARHL2Q9NY43 387 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 DDX60LQ5H9U9 1706 aaKnown RBP12.29□□□□□ -0.44
C9orf3-214ENST00000473778 RHOBTB3O94955 611 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 FCER1AP12319 257 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 HNRNPH2P55795 449 aaKnown RBP12.29□□□□□ -0.44
C9orf3-214ENST00000473778 STK4Q13043 487 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 MCM6Q14566 821 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 BRD3Q15059 726 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 TXNRD1Q16881 649 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 TMEM47Q9BQJ4 181 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 PDE11AQ9HCR9 933 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 SAP30BPQ9UHR5 308 aaKnown RBP12.29□□□□□ -0.44
C9orf3-214ENST00000473778 L1RE1Q9UN81 338 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 STX8Q9UNK0 236 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 SNED1Q8TER0 1413 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 ROBO3Q96MS0 1386 aa12.29□□□□□ -0.44
C9orf3-214ENST00000473778 PALM3A6NDB9 673 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 NUTM2BA6NNL0 878 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 NUTM2EB1AL46 878 aaPredicted RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 PES1O00541 588 aaKnown RBP12.28□□□□□ -0.44
C9orf3-214ENST00000473778 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 PLCG1P19174 1290 aa12.28□□□□□ -0.44
C9orf3-214ENST00000473778 FAM193AP78312 1265 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms