RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 PRPF38AQ8NAV1 312 aaKnown RBP15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 NUP88Q99567 741 aaPredicted RBP15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 INCENPQ9NQS7 918 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 PRDM6Q9NQX0 595 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 PDLIM7Q9NR12 457 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 FEM1BQ9UK73 627 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
SHROOM3-204ENST00000473602 FDX1P10109 184 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 FOSL2P15408 326 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 CHMLP26374 656 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 PLS1Q14651 629 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 TMEM132BQ14DG7 1078 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 LRRC41Q15345 812 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 IMMTQ16891 758 aaKnown RBP15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 SLFN13Q68D06 897 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 SAMD1Q6SPF0 538 aaPredicted RBP15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 RIOX2Q8IUF8 465 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 TBC1D10CQ8IV04 446 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 ABRAQ8N0Z2 381 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 ESR2Q92731 530 aa15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 ZNF214Q9UL59 606 aaPredicted RBP15.28■□□□□ 0.04
SHROOM3-204ENST00000473602 ATP2A1O14983 1001 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 BMP3P12645 472 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 SLC1A4P43007 532 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 TLE2Q04725 743 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 NCAPG2Q86XI2 1143 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 REPS2Q8NFH8 660 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 TTC14Q96N46 770 aa15.27■□□□□ 0.04
SHROOM3-204ENST00000473602 PLXNA1Q9UIW2 1896 aa15.27■□□□□ 0.03
SHROOM3-204ENST00000473602 NMT2O60551 498 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 PLA2G6O60733 806 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 TOP1P11387 765 aaKnown RBP15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 ITGB8P26012 769 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 STAT3P40763 770 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 STAT2P52630 851 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 OAZ1P54368 228 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 C1orf53Q5VUE5 145 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 TEX13BQ9BXU2 312 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 IL25Q9H293 177 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 SLC5A4Q9NY91 659 aa15.26■□□□□ 0.03
SHROOM3-204ENST00000473602 MUC3AQ02505 3323 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 NEDD4P46934 1319 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 ZBED4O75132 1171 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 FCER1AP12319 257 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 EPHB4P54760 987 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 CCDC178Q5BJE1 867 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 RCSD1Q6JBY9 416 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 DCAF4Q8WV16 495 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 RNPC3Q96LT9 517 aaKnown RBP15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 SLC38A10Q9HBR0 1119 aa15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 CTDP1Q9Y5B0 961 aaPredicted RBP15.25■□□□□ 0.03
SHROOM3-204ENST00000473602 FRMPD3Q5JV73 1810 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 TMEM232C9JQI7 657 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 SGSM2O43147 1006 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 NEFLP07196 543 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 MCCP23508 829 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 IQCA1Q86XH1 822 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 KIFC2Q96AC6 838 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 MAML3Q96JK9 1138 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 TMEM47Q9BQJ4 181 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 KRT23Q9C075 422 aa15.24■□□□□ 0.03
SHROOM3-204ENST00000473602 CLTBP09497 229 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 KCTD2Q14681 263 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 BMP2KLQ5H9B9 411 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 SNRNP48Q6IEG0 339 aaKnown RBP15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 DGKHQ86XP1 1220 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 MMP19Q99542 508 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 XPNPEP3Q9NQH7 507 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 ISY1Q9ULR0 285 aaKnown RBP15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 PHF24Q9UPV7 400 aa15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 U3KPZ7 1027 aaPredicted RBP15.23■□□□□ 0.03
SHROOM3-204ENST00000473602 TMEM265A0A087WTH1 108 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 PQBP1O60828 265 aaKnown RBP15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 KDM4AO75164 1064 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 PGK1P00558 417 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 RARBP10826 455 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 RAG1P15918 1043 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 IKQ13123 557 aaPredicted RBP15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 GRIN2CQ14957 1233 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 FBXO40Q9UH90 709 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 DIS3Q9Y2L1 958 aaKnown RBP15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 LTBP2Q14767 1821 aa15.22■□□□□ 0.03
SHROOM3-204ENST00000473602 B4E1Z4 1266 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 CCDC96Q2M329 555 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 KCTD1Q719H9 257 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 RNF180Q86T96 592 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 USP38Q8NB14 1042 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 CHST13Q8NET6 341 aa15.21■□□□□ 0.03
SHROOM3-204ENST00000473602 ANKS1AQ92625 1134 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms