RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 PIGSQ96S52 555 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 VAT1LQ9HCJ6 419 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 SH3GLB2Q9NR46 395 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 OTOFQ9HC10 1997 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 BRD2P25440 801 aaKnown RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 NF2P35240 595 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 TTLL12Q14166 644 aaPredicted RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 DIS3L2Q8IYB7 885 aaKnown RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 ADGRF4Q8IZF3 695 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 ZKSCAN4Q969J2 545 aaPredicted RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 VCPKMTQ9H867 229 aa16.94■□□□□ 0.3
LMNA-213ENST00000473598 SEC63Q9UGP8 760 aaKnown RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 ABT1Q9ULW3 272 aaKnown RBP16.94■□□□□ 0.3
LMNA-213ENST00000473598 CCDC66A2RUB6 948 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 USP2O75604 605 aaPredicted RBP16.93■□□□□ 0.3
LMNA-213ENST00000473598 BMP3P12645 472 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 SLC16A2P36021 539 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 KIAA1755Q5JYT7 1200 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 WWC2Q6AWC2 1192 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 SAPCD2Q86UD0 394 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 HOMER1Q86YM7 354 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 GPKOWQ92917 476 aaPredicted RBP eCLIP16.93■□□□□ 0.31e-9■■■■□ 23.2
LMNA-213ENST00000473598 NUP88Q99567 741 aaPredicted RBP16.93■□□□□ 0.3
LMNA-213ENST00000473598 FOXP1Q9H334 677 aaPredicted RBP16.93■□□□□ 0.3
LMNA-213ENST00000473598 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 CREBZFQ9NS37 354 aa16.93■□□□□ 0.3
LMNA-213ENST00000473598 BTBD18B2RXH4 712 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 ATL3Q6DD88 541 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 ZNF771Q7L3S4 317 aaPredicted RBP16.92■□□□□ 0.3
LMNA-213ENST00000473598 SPICE1Q8N0Z3 855 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 C2orf69Q8N8R5 385 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 BARHL2Q9NY43 387 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 FIBPO43427 364 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 HUNKP57058 714 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 UBE2HP62256 183 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 NOL9Q5SY16 702 aaKnown RBP16.92■□□□□ 0.3
LMNA-213ENST00000473598 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 HEATR3Q7Z4Q2 680 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 FAM177A1Q8N128 213 aaPredicted RBP16.92■□□□□ 0.3
LMNA-213ENST00000473598 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
LMNA-213ENST00000473598 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
LMNA-213ENST00000473598 MTMR8Q96EF0 704 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
LMNA-213ENST00000473598 RBSNQ9H1K0 784 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 PICK1Q9NRD5 415 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 TFIP11Q9UBB9 837 aaKnown RBP16.92■□□□□ 0.3
LMNA-213ENST00000473598 CFAP45Q9UL16 551 aa16.92■□□□□ 0.3
LMNA-213ENST00000473598 STXBP3O00186 592 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 PTPRAP18433 802 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 KRT2P35908 639 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 NLRP5P59047 1200 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 NPY5RQ15761 445 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 ZYXQ15942 572 aaKnown RBP16.91■□□□□ 0.3
LMNA-213ENST00000473598 LRSAM1Q6UWE0 723 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 BTNL9Q6UXG8 535 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 NOSTRINQ8IVI9 506 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 CCDC148Q8NFR7 591 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 SCAND2PQ9GZW5 306 aaPredicted RBP16.91■□□□□ 0.3
LMNA-213ENST00000473598 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 TLL2Q9Y6L7 1015 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 PNMA6FA0A0J9YX94 578 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 SYCE3A1L190 88 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 USP17L10C9JJH3 530 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 TMEM232C9JQI7 657 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 PPP1R12BO60237 982 aaPredicted RBP16.91■□□□□ 0.3
LMNA-213ENST00000473598 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
LMNA-213ENST00000473598 OXER1Q8TDS5 423 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 TSPYL1Q9H0U9 437 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 AS3MTQ9HBK9 375 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 BRMS1Q9HCU9 246 aa16.91■□□□□ 0.3
LMNA-213ENST00000473598 ZBTB5O15062 677 aa16.9■□□□□ 0.3
LMNA-213ENST00000473598 CALML3P27482 149 aa16.9■□□□□ 0.3
LMNA-213ENST00000473598 NR5A1Q13285 461 aa16.9■□□□□ 0.3
LMNA-213ENST00000473598 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
LMNA-213ENST00000473598 WDR18Q9BV38 432 aa16.9■□□□□ 0.3
LMNA-213ENST00000473598 STAT2P52630 851 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.29
LMNA-213ENST00000473598 CLMNQ96JQ2 1002 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 USP28Q96RU2 1077 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 NAPAP54920 295 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 MAP3K9P80192 1104 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 IKQ13123 557 aaPredicted RBP16.89■□□□□ 0.29
LMNA-213ENST00000473598 SYDE2Q5VT97 1194 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 GALNT17Q6IS24 598 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 ZNF280CQ8ND82 737 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 LPAR1Q92633 364 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 SPATA32Q96LK8 384 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 OGFRQ9NZT2 677 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 PCDHA4Q9UN74 947 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 ELP1O95163 1332 aa16.89■□□□□ 0.29
LMNA-213ENST00000473598 PLA2G6O60733 806 aa16.88■□□□□ 0.29
LMNA-213ENST00000473598 FKBP1BP68106 108 aa16.88■□□□□ 0.29
LMNA-213ENST00000473598 SPP2Q13103 211 aa16.88■□□□□ 0.29
LMNA-213ENST00000473598 GRM1Q13255 1194 aa16.88■□□□□ 0.29
LMNA-213ENST00000473598 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms