RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 ZNF280AP59817 542 aaPredicted RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 TBX2Q13207 712 aaPredicted RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 SAFBQ15424 915 aaKnown RBP eCLIP7.08□□□□□ -1.28
RTF1-203ENST00000473214 HIF1AQ16665 826 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 EEPD1Q7L9B9 569 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 LCA5Q86VQ0 697 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 SNX32Q86XE0 403 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 DMRTC2Q8IXT2 367 aaPredicted RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 WDR66Q8TBY9 1149 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 EPS8L3Q8TE67 593 aaKnown RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 TRIM44Q96DX7 344 aaPredicted RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 LUC7LQ9NQ29 371 aaKnown RBP7.08□□□□□ -1.28
RTF1-203ENST00000473214 SH3GLB2Q9NR46 395 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 IP6K2Q9UHH9 426 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 ZMYM5Q9UJ78 669 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 USP21Q9UK80 565 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 RNF112Q9ULX5 631 aa7.08□□□□□ -1.28
RTF1-203ENST00000473214 ZFYVE16Q7Z3T8 1539 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 FANCAO15360 1455 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 F5H423 210 aaPredicted RBP7.07□□□□□ -1.28
RTF1-203ENST00000473214 ABLIM3O94929 683 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 GJB6O95452 261 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 IGHDP01880 384 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 U2AF1L5P0DN76 240 aaPredicted RBP7.07□□□□□ -1.28
RTF1-203ENST00000473214 NCAM1P13591 858 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 ADD2P35612 726 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 CCT5P48643 541 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 EIF6P56537 245 aaKnown RBP7.07□□□□□ -1.28
RTF1-203ENST00000473214 PSMC1P62191 440 aaKnown RBP7.07□□□□□ -1.28
RTF1-203ENST00000473214 U2AF1Q01081 240 aaKnown RBP eCLIP7.07□□□□□ -1.28
RTF1-203ENST00000473214 CBX2Q14781 532 aaPredicted RBP7.07□□□□□ -1.28
RTF1-203ENST00000473214 ELF2Q15723 593 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 FAM26DQ5JW98 314 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 DACT2Q5SW24 774 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 IER5Q5VY09 327 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 MZT2BQ6NZ67 158 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 CNNM4Q6P4Q7 775 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 UBE2Q1Q7Z7E8 422 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 TPH2Q8IWU9 490 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 PARD3BQ8TEW8 1205 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 NELL1Q92832 810 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 TNIP3Q96KP6 325 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 TMEM74Q96NL1 305 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 NLRC4Q9NPP4 1024 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 UBP1Q9NZI7 540 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 TMCC3Q9ULS5 477 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 PHTF1Q9UMS5 762 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 DMTF1Q9Y222 760 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 PHLDB1Q86UU1 1377 aa7.07□□□□□ -1.28
RTF1-203ENST00000473214 ZMYM4Q5VZL5 1548 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 HECW1Q76N89 1606 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 RGS9O75916 674 aaPredicted RBP7.06□□□□□ -1.28
RTF1-203ENST00000473214 EYA4O95677 639 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 APPP05067 770 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 HNRNPCP07910 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
RTF1-203ENST00000473214 PCSK2P16519 638 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 PEX19P40855 299 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 TSPAN7P41732 249 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 PIK3CAP42336 1068 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 STRN3Q13033 797 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 CCINQ13939 588 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 KRT72Q14CN4 511 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 GRIK5Q16478 980 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 MINDY4Q4G0A6 757 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 FBXW10Q5XX13 1052 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 LMBRD2Q68DH5 695 aaPredicted RBP7.06□□□□□ -1.28
RTF1-203ENST00000473214 LHFPL2Q6ZUX7 228 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 DTWD1Q8N5C7 304 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 NKD1Q969G9 470 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 CCDC74AQ96AQ1 378 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 TARS2Q9BW92 718 aaKnown RBP7.06□□□□□ -1.28
RTF1-203ENST00000473214 AP1M1Q9BXS5 423 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 PDGFDQ9GZP0 370 aaPredicted RBP7.06□□□□□ -1.28
RTF1-203ENST00000473214 TRHDEQ9UKU6 1024 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 HDAC5Q9UQL6 1122 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 AFG3L2Q9Y4W6 797 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
RTF1-203ENST00000473214 PTPRTO14522 1441 aa7.06□□□□□ -1.28
RTF1-203ENST00000473214 DENND4BO75064 1496 aaPredicted RBP7.05□□□□□ -1.28
RTF1-203ENST00000473214 ZNF335Q9H4Z2 1342 aaPredicted RBP7.05□□□□□ -1.28
RTF1-203ENST00000473214 FHOD3Q2V2M9 1422 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 AKNAQ7Z591 1439 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 C9IYK1 514 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 J3KRW8 73 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 VAMP4O75379 141 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 FAM153BP0C7A2 387 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 NFKB1P19838 968 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 LMNB1P20700 586 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 HSPA1LP34931 641 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 ZNF131P52739 623 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 SLC9A5Q14940 896 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 DUSP27Q5VZP5 1158 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 RNF219Q5W0B1 726 aaPredicted RBP7.05□□□□□ -1.28
RTF1-203ENST00000473214 XRRA1Q6P2D8 792 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 FBXL19Q6PCT2 694 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 SRLQ86TD4 932 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
RTF1-203ENST00000473214 TTC16Q8NEE8 873 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms