RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TRPA1O75762 1119 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 ALDH1A1P00352 501 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
SMC4-214ENST00000472991 NT5C2P49902 561 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
SMC4-214ENST00000472991 KIAA1755Q5JYT7 1200 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 MB21D2Q8IYB1 491 aaPredicted RBP10.69□□□□□ -0.7
SMC4-214ENST00000472991 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 FAM160A2Q8N612 972 aaPredicted RBP10.69□□□□□ -0.7
SMC4-214ENST00000472991 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 ZSWIM5Q9P217 1185 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 PLXNB2O15031 1838 aa10.69□□□□□ -0.7
SMC4-214ENST00000472991 BAZ2BQ9UIF8 2168 aaKnown RBP10.69□□□□□ -0.7
SMC4-214ENST00000472991 FOXN1O15353 648 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 FMNL1O95466 1100 aaPredicted RBP10.68□□□□□ -0.7
SMC4-214ENST00000472991 MCCP23508 829 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 NOVP48745 357 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 ANTXR2P58335 489 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 PABPC4Q13310 644 aaKnown RBP eCLIP10.68□□□□□ -0.78e-9■■■■■ 603.5
SMC4-214ENST00000472991 CRHR2Q13324 411 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 ADCK5Q3MIX3 580 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.68□□□□□ -0.71e-6■■■■■ 406.9
SMC4-214ENST00000472991 RASGRP2Q7LDG7 609 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 CHST3Q7LGC8 479 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 ENAHQ8N8S7 591 aaPredicted RBP10.68□□□□□ -0.7
SMC4-214ENST00000472991 KCNB2Q92953 911 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 MKL1Q969V6 931 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 ZSCAN10Q96SZ4 725 aaPredicted RBP10.68□□□□□ -0.7
SMC4-214ENST00000472991 TMEM47Q9BQJ4 181 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 UBAC1Q9BSL1 405 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 RPAP3Q9H6T3 665 aaPredicted RBP10.68□□□□□ -0.7
SMC4-214ENST00000472991 ZCCHC17Q9NP64 241 aaKnown RBP10.68□□□□□ -0.7
SMC4-214ENST00000472991 SAGE1Q9NXZ1 904 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 SLC45A1Q9Y2W3 748 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 SNX14Q9Y5W7 946 aa10.68□□□□□ -0.7
SMC4-214ENST00000472991 RBBP6Q7Z6E9 1792 aaKnown RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 F5H6K3 240 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 WDR46O15213 610 aaKnown RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 CA12O43570 354 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 TBC1D8O95759 1140 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 NDUFB10O96000 172 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 CYP2C8P10632 490 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 TOP1P11387 765 aaKnown RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 IRX3P78415 501 aaPredicted RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 PRR20EP86478 221 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 PRR20CP86479 221 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 PRR20DP86480 221 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 PRR20BP86481 221 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 PRR20AP86496 221 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 KLRC3Q07444 240 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 KRT32Q14532 448 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 ZNF697Q5TEC3 545 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 GMCL1P1Q8NEA9 526 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 LPAR1Q92633 364 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 CHMP4CQ96CF2 233 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 PARK7Q99497 189 aaKnown RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 NUP88Q99567 741 aaPredicted RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 TANGO6Q9C0B7 1094 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 ASCC2Q9H1I8 757 aaPredicted RBP10.67□□□□□ -0.7
SMC4-214ENST00000472991 R3HDMLQ9H3Y0 253 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 ZFYVE28Q9HCC9 887 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 SYNPO2Q9UMS6 1093 aa10.67□□□□□ -0.7
SMC4-214ENST00000472991 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L15C9J2P7 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L13C9JLJ4 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L11C9JVI0 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L18D6R9N7 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L22D6RA61 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L17D6RBQ6 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L19D6RCP7 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L20D6RJB6 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 IFIT3O14879 490 aaKnown RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 PRC1O43663 620 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 EIF5BO60841 1220 aaKnown RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 HOXA7P31268 230 aaPredicted RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 MCM5P33992 734 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 USP17L24Q0WX57 530 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 SART3Q15020 963 aaKnown RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 SEC23AQ15436 765 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 FAM83BQ5T0W9 1011 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 IFIT1BQ5T764 474 aaKnown RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 SLFN13Q68D06 897 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 DGKHQ86XP1 1220 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 SMCR8Q8TEV9 937 aaPredicted RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 JAKMIP1Q96N16 626 aaKnown RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 TTC14Q96N46 770 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 CFHR5Q9BXR6 569 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 LRRC2Q9BYS8 371 aa10.66□□□□□ -0.7
SMC4-214ENST00000472991 ISY1Q9ULR0 285 aaKnown RBP10.66□□□□□ -0.7
SMC4-214ENST00000472991 ERICH2A1L162 156 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms