RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 FOXR1Q6PIV2 292 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 DHX58Q96C10 678 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 WDR24Q96S15 920 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 BAG1Q99933 345 aaPredicted RBP11.41□□□□□ -0.58
APTX-216ENST00000472896 ANKZF1Q9H8Y5 726 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 CDC23Q9UJX2 597 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 ANKRD18BA2A2Z9 1011 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
APTX-216ENST00000472896 CALRP27797 417 aaKnown RBP11.41□□□□□ -0.58
APTX-216ENST00000472896 FOXO4P98177 505 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 CASP8Q14790 479 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 GRIK5Q16478 980 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 ZNF804AQ7Z570 1209 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 KCNG4Q8TDN1 519 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 USP28Q96RU2 1077 aa11.41□□□□□ -0.58
APTX-216ENST00000472896 FAM205AQ6ZU69 1335 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 ATXN2Q99700 1313 aaKnown RBP11.4□□□□□ -0.58
APTX-216ENST00000472896 SZT2Q5T011 3432 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 JAK2O60674 1132 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 PFKFB2O60825 505 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 YEATS4O95619 227 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 SERPINC1P01008 464 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 IFIT2P09913 472 aaKnown RBP11.4□□□□□ -0.58
APTX-216ENST00000472896 TDO2P48775 406 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 MYL5Q02045 173 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 TBX2Q13207 712 aaPredicted RBP11.4□□□□□ -0.58
APTX-216ENST00000472896 KIF22Q14807 665 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 CCDC12Q8WUD4 166 aaPredicted RBP11.4□□□□□ -0.58
APTX-216ENST00000472896 TRIM47Q96LD4 638 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 ABCB6Q9NP58 842 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 CPA4Q9UI42 421 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 TTF2Q9UNY4 1162 aaKnown RBP11.4□□□□□ -0.58
APTX-216ENST00000472896 SNCAIPQ9Y6H5 919 aa11.4□□□□□ -0.58
APTX-216ENST00000472896 A6NNZ2 444 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 SHOX2O60902 331 aaPredicted RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 DTNBO60941 627 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CETPP11597 493 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 MNAT1P51948 309 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 STK3Q13188 491 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 NMIQ13287 307 aaPredicted RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 MTX1Q13505 466 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 TNFAIP1Q13829 316 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 E2F4Q16254 413 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 WDR93Q6P2C0 686 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 ZKSCAN4Q969J2 545 aaPredicted RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 ZNF594Q96JF6 807 aaPredicted RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 NEK1Q96PY6 1258 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 SRRDQ9UH36 339 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CSADQ9Y600 493 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 IRF6O14896 467 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CCL5P13501 91 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 PSMC4P43686 418 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CRKP46108 304 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 GJA8P48165 433 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CACNB3P54284 484 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 MAP9Q49MG5 647 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 MFSD14BQ5SR56 506 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 CNPY4Q8N129 248 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 NAA15Q9BXJ9 866 aaKnown RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 BICC1Q9H694 974 aaKnown RBP11.39□□□□□ -0.59
APTX-216ENST00000472896 FAM204AQ9H8W3 233 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 TUBE1Q9UJT0 475 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
APTX-216ENST00000472896 EBAG9O00559 213 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 GNRH1P01148 92 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 GJB1P08034 283 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 CCDC175P0C221 793 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 OSBPP22059 807 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 GYG1P46976 350 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 PRMT2P55345 433 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 IFIT5Q13325 482 aaKnown RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 EPHA10Q5JZY3 1008 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 SPATS2Q86XZ4 545 aaKnown RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 ERO1BQ86YB8 467 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 FAM177A1Q8N128 213 aaPredicted RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 NSUN7Q8NE18 718 aaKnown RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 LRCH3Q96II8 777 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 RBM28Q9NW13 759 aaKnown RBP11.38□□□□□ -0.59
APTX-216ENST00000472896 RIPOR2Q9Y4F9 1068 aa11.38□□□□□ -0.59
APTX-216ENST00000472896 TMCO5BA8MYB1 307 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 KIF5CO60282 957 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 N4BP1O75113 896 aaKnown RBP11.37□□□□□ -0.59
APTX-216ENST00000472896 GRK4P32298 578 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 NDUFA8P51970 172 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 SNAPC2Q13487 334 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 SF3A1Q15459 793 aaKnown RBP11.37□□□□□ -0.59
APTX-216ENST00000472896 FAM84BQ96KN1 310 aaPredicted RBP11.37□□□□□ -0.59
APTX-216ENST00000472896 RNF208Q9H0X6 261 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 HSD3B7Q9H2F3 369 aa11.37□□□□□ -0.59
APTX-216ENST00000472896 RFX7Q2KHR2 1363 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms