RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SMC1BQ8NDV3 1235 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 OR6P1Q8NGX9 317 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 SLC26A8Q96RN1 970 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 NOL6Q9H6R4 1146 aaKnown RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 TOPORSQ9NS56 1045 aaPredicted RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 FBXO9Q9UK97 447 aaPredicted RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 PHTF1Q9UMS5 762 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 DYRK1BQ9Y463 629 aa3.39□□□□□ -1.87
XRN1-210ENST00000472697 MORC2Q9Y6X9 1032 aaPredicted RBP3.39□□□□□ -1.87
XRN1-210ENST00000472697 FRMPD2Q68DX3 1309 aaPredicted RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 FKBP9O95302 570 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 IMPDH2P12268 514 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 OSMP13725 252 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 YBX3P16989 372 aaKnown RBP eCLIP3.38□□□□□ -1.87
XRN1-210ENST00000472697 BPIP17213 487 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 CD53P19397 219 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 HALP42357 657 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 PTSQ03393 145 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 STK3Q13188 491 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 SAMD5Q5TGI4 173 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 SWSAP1Q6NVH7 229 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 PGM2L1Q6PCE3 622 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 FKBP9P1Q75LS8 142 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 CYP4X1Q8N118 509 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 WNK4Q96J92 1243 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 UBE2OQ9C0C9 1292 aaKnown RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 C9orf78Q9NZ63 289 aaPredicted RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 SAMD15Q9P1V8 674 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 USP25Q9UHP3 1055 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 PPP1R9AQ9ULJ8 1098 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 LZTS1Q9Y250 596 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 PCDHGC4Q9Y5F7 938 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 EIF4G3O43432 1585 aaKnown RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 XPOTO43592 962 aaKnown RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 AP1G1O43747 822 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 FBXO21O94952 628 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 LPOP22079 712 aaPredicted RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 ECI1P42126 302 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 BAG6P46379 1132 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 IL2P60568 153 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 GPSM2P81274 684 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 LONRF1Q17RB8 773 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 TRIM61Q5EBN2 209 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 RNF219Q5W0B1 726 aaPredicted RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 LVRNQ6Q4G3 990 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 B3GNT9Q6UX72 402 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 CYFIP1Q7L576 1253 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 SYNPOQ8N3V7 929 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 CISD2Q8N5K1 135 aaKnown RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 FAM13CQ8NE31 585 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 CLIP3Q96DZ5 547 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 NT5C1BQ96P26 610 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 LGR6Q9HBX8 967 aa3.38□□□□□ -1.87
XRN1-210ENST00000472697 LUC7LQ9NQ29 371 aaKnown RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 GEMIN8Q9NWZ8 242 aaKnown RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 COL17A1Q9UMD9 1497 aaPredicted RBP3.38□□□□□ -1.87
XRN1-210ENST00000472697 NPHP1O15259 732 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ATP2A2P16615 1042 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 DGKGP49619 791 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 RENBPP51606 427 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 RING1Q06587 406 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PDE3AQ14432 1141 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 NCAPHQ15003 741 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 GFOD2Q3B7J2 385 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PRAMEF13Q5VWM6 474 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 MBLAC2Q68D91 279 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ZCCHC8Q6NZY4 707 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 C1orf228Q6PIY5 440 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 USP53Q70EK8 1073 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 SCUBE1Q8IWY4 988 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ZBTB34Q8NCN2 500 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 USP7Q93009 1102 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ELMO3Q96BJ8 720 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 IFT22Q9H7X7 185 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 CGGBP1Q9UFW8 167 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 FANCD2Q9BXW9 1451 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 CFAP69A5D8W1 941 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 TPP1O14773 563 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ST8SIA5O15466 376 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 TCEA3O75764 348 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 GHRHP01286 108 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 NEFMP07197 916 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 NBPF7P0C2Y1 421 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 PTX3P26022 381 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 OS9Q13438 667 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 SAFBQ15424 915 aaKnown RBP eCLIP3.37□□□□□ -1.87
XRN1-210ENST00000472697 ZC3H12AQ5D1E8 599 aaKnown RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 EFHC2Q5JST6 749 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 CREB3L3Q68CJ9 461 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PSAPL1Q6NUJ1 521 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 CCDC174Q6PII3 467 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 NECAB2Q7Z6G3 386 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 IFNL3Q8IZI9 196 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PPM1KQ8N3J5 372 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 PPM1NQ8N819 430 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 FAM156AQ8NDB6 213 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 C1orf162Q8NEQ5 155 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 POF1BQ8WVV4 589 aa3.37□□□□□ -1.87
XRN1-210ENST00000472697 ZNF837Q96EG3 531 aaPredicted RBP3.37□□□□□ -1.87
XRN1-210ENST00000472697 MRGPRX3Q96LB0 322 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms