RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ACRP10323 421 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 CSF2RAP15509 400 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 CDK7P50613 346 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 TFF2Q03403 129 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 KCNA10Q16322 511 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 RASIP1Q5U651 963 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 ZNF365Q70YC5 407 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
VCL-204ENST00000472585 CCDC17Q96LX7 622 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 GLT1D1Q96MS3 346 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 PUS7LQ9H0K6 701 aaKnown RBP11.24□□□□□ -0.61
VCL-204ENST00000472585 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 EPHX3Q9H6B9 360 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 ATP8A2Q9NTI2 1148 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 TBX21Q9UL17 535 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 CNPY2Q9Y2B0 182 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 SYNRGQ9UMZ2 1314 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 REV3LO60673 3130 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
VCL-204ENST00000472585 KCNQ1P51787 676 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 KCTD2Q14681 263 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 ERC1Q8IUD2 1116 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 HERVK_113Q902F9 699 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 KANSL2Q9H9L4 492 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 PAG1Q9NWQ8 432 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 ZBED9Q6R2W3 1325 aa11.23□□□□□ -0.61
VCL-204ENST00000472585 CHD7Q9P2D1 2997 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 TRANK1O15050 2925 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 FGBP02675 491 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 COL11A1P12107 1806 aaPredicted RBP11.22□□□□□ -0.61
VCL-204ENST00000472585 ATP5JP18859 108 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 PTGS1P23219 599 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 PRRC2BQ5JSZ5 2229 aaKnown RBP11.22□□□□□ -0.61
VCL-204ENST00000472585 PPP2R2DQ66LE6 453 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
VCL-204ENST00000472585 NAV1Q8NEY1 1877 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 ROBO3Q96MS0 1386 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 KATNBL1Q9H079 304 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 FAM184BQ9ULE4 1060 aa11.22□□□□□ -0.61
VCL-204ENST00000472585 DDX49Q9Y6V7 483 aaKnown RBP11.22□□□□□ -0.61
VCL-204ENST00000472585 MYH8P13535 1937 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 PARP14Q460N5 1801 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 ELP1O95163 1332 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
VCL-204ENST00000472585 RASA1P20936 1047 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 TIE1P35590 1138 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 TMEM63BQ5T3F8 832 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
VCL-204ENST00000472585 STK11IPQ8N1F8 1099 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 CLASRPQ8N2M8 674 aaKnown RBP11.21□□□□□ -0.61
VCL-204ENST00000472585 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
VCL-204ENST00000472585 VWCEQ96DN2 955 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 KIF1BPQ96EK5 621 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 HAUS7Q99871 368 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 SH2D4AQ9H788 454 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 SPC25Q9HBM1 224 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 IL23AQ9NPF7 189 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 SLC4A4Q9Y6R1 1079 aa11.21□□□□□ -0.61
VCL-204ENST00000472585 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.62
VCL-204ENST00000472585 ASTN1O14525 1302 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 IGKV6D-41A0A0C4DH26 115 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 A0A0U1RQG5 324 aaPredicted RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 F5H6K3 240 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 ERC2O15083 957 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 RAD21O60216 631 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 DUSP11O75319 330 aaKnown RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 ASGR1P07306 291 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 IFIT2P09913 472 aaKnown RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 KLRC3Q07444 240 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 UBE3CQ15386 1083 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 OTOP2Q7RTS6 562 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 STRBPQ96SI9 672 aaKnown RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 SLF1Q9BQI6 1058 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 RAVER2Q9HCJ3 691 aaKnown RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 ZBTB40Q9NUA8 1239 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 ZHX1Q9UKY1 873 aaPredicted RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 COG5Q9UP83 839 aa11.2□□□□□ -0.62
VCL-204ENST00000472585 YBX2Q9Y2T7 364 aaKnown RBP11.2□□□□□ -0.62
VCL-204ENST00000472585 GRIN2DO15399 1336 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 UMODL1Q5DID0 1318 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 ARVCFO00192 962 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 ATP2A1O14983 1001 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 GPR37L1O60883 481 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 NDUFB10O96000 172 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 CD4P01730 458 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 CST5P28325 142 aaPredicted RBP11.19□□□□□ -0.62
VCL-204ENST00000472585 CYP2C18P33260 490 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 GJA9P57773 515 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 CNTN2Q02246 1040 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
VCL-204ENST00000472585 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms