RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 LGR6Q9HBX8 967 aa9.37□□□□□ -0.91
SCAF4-205ENST00000472318 IGSF5Q9NSI5 407 aa9.37□□□□□ -0.91
SCAF4-205ENST00000472318 KIF13BQ9NQT8 1826 aa9.37□□□□□ -0.91
SCAF4-205ENST00000472318 NSD3Q9BZ95 1437 aa9.37□□□□□ -0.91
SCAF4-205ENST00000472318 PDE4DIPQ5VU43 2346 aa9.37□□□□□ -0.91
SCAF4-205ENST00000472318 PASKQ96RG2 1323 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 MAPK8P45983 427 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 CDK5R2Q13319 367 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 CBLL1Q75N03 491 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 KRTAP19-1Q8IUB9 90 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 LTV1Q96GA3 475 aaPredicted RBP9.36□□□□□ -0.91
SCAF4-205ENST00000472318 PPM1HQ9ULR3 514 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 MEGF6O75095 1541 aa9.36□□□□□ -0.91
SCAF4-205ENST00000472318 TTC21AQ8NDW8 1320 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 NEFMP07197 916 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 CHRNA5P30532 468 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 CYP27C1Q4G0S4 372 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 ZC3H12AQ5D1E8 599 aaKnown RBP9.35□□□□□ -0.91
SCAF4-205ENST00000472318 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
SCAF4-205ENST00000472318 SETDB2Q96T68 719 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 EMILIN2Q9BXX0 1053 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
SCAF4-205ENST00000472318 UBR3Q6ZT12 1888 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 ENC1O14682 589 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 HCLS1P14317 486 aaPredicted RBP9.34□□□□□ -0.91
SCAF4-205ENST00000472318 LMNB1P20700 586 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
SCAF4-205ENST00000472318 ERVK-24P63145 666 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 TMF1P82094 1093 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 ITPK1Q13572 414 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 ALG1LQ6GMV1 187 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 NLGN1Q8N2Q7 840 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 OSBPL7Q9BZF2 842 aa9.34□□□□□ -0.91
SCAF4-205ENST00000472318 PAK6Q9NQU5 681 aaPredicted RBP9.34□□□□□ -0.91
SCAF4-205ENST00000472318 RBM47A0AV96 593 aaKnown RBP9.33□□□□□ -0.92
SCAF4-205ENST00000472318 FAM87AP0C7U9 286 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 GYS1P13807 737 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 MAP2K1Q02750 393 aaPredicted RBP9.33□□□□□ -0.92
SCAF4-205ENST00000472318 TPTE2Q6XPS3 522 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 KRTAP1-3Q8IUG1 177 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCAF4-205ENST00000472318 TP53INP2Q8IXH6 220 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 DHX37Q8IY37 1157 aaKnown RBP9.33□□□□□ -0.92
SCAF4-205ENST00000472318 FLCNQ8NFG4 579 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 CEP44Q9C0F1 390 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 BRCA1P38398 1863 aaKnown RBP9.33□□□□□ -0.92
SCAF4-205ENST00000472318 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 TAF1LQ8IZX4 1826 aa9.33□□□□□ -0.92
SCAF4-205ENST00000472318 CENPJQ9HC77 1338 aaPredicted RBP9.32□□□□□ -0.92
SCAF4-205ENST00000472318 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 GIPC1O14908 333 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 COL19A1Q14993 1142 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 LCE3BQ5TA77 95 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 NME9Q86XW9 330 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 WFDC3Q8IUB2 231 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 RNF214Q8ND24 703 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 AGBL5Q8NDL9 886 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 IP6K1Q92551 441 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 SMARCC1Q92922 1105 aaPredicted RBP9.32□□□□□ -0.92
SCAF4-205ENST00000472318 ISL2Q96A47 359 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 GOLGA2P5Q9HBQ8 144 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 PCOLCE2Q9UKZ9 415 aa9.32□□□□□ -0.92
SCAF4-205ENST00000472318 WDR33Q9C0J8 1336 aaKnown RBP9.31□□□□□ -0.92
SCAF4-205ENST00000472318 ARFGEF1Q9Y6D6 1849 aa9.31□□□□□ -0.92
SCAF4-205ENST00000472318 PAGE1O75459 146 aa9.31□□□□□ -0.92
SCAF4-205ENST00000472318 DEFB115Q30KQ5 88 aa9.31□□□□□ -0.92
SCAF4-205ENST00000472318 BCL7CQ8WUZ0 217 aaPredicted RBP9.31□□□□□ -0.92
SCAF4-205ENST00000472318 PIGBQ92521 554 aa9.31□□□□□ -0.92
SCAF4-205ENST00000472318 RNGTTO60942 597 aaKnown RBP9.3□□□□□ -0.92
SCAF4-205ENST00000472318 BMP6P22004 513 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 SOX10P56693 466 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 ATP2B2Q01814 1243 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 STK11IPQ8N1F8 1099 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 DUSP23Q9BVJ7 150 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 CBX8Q9HC52 389 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 SAMM50Q9Y512 469 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 C4AP0C0L4 1744 aa9.3□□□□□ -0.92
SCAF4-205ENST00000472318 FAM208AQ9UK61 1670 aaKnown RBP9.29□□□□□ -0.92
SCAF4-205ENST00000472318 VIRMAQ69YN4 1812 aaKnown RBP9.29□□□□□ -0.92
SCAF4-205ENST00000472318 KTN1Q86UP2 1357 aaKnown RBP9.29□□□□□ -0.92
SCAF4-205ENST00000472318 FBXO24O75426 580 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 P4HBP07237 508 aaKnown RBP9.29□□□□□ -0.92
SCAF4-205ENST00000472318 NTF4P34130 210 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 TXKP42681 527 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 DDR1Q08345 913 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 USHBP1Q8N6Y0 703 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 MISP3Q96FF7 219 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 C12orf49Q9H741 205 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 MKNK2Q9HBH9 465 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 SPG7Q9UQ90 795 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 SLC5A6Q9Y289 635 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 RNF114Q9Y508 228 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 U3KQE9 123 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 SBF1O95248 1867 aa9.29□□□□□ -0.92
SCAF4-205ENST00000472318 CYP27B1O15528 508 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 LEFTY1O75610 366 aa9.28□□□□□ -0.92
SCAF4-205ENST00000472318 DDNO94850 711 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms