RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 AMNQ9BXJ7 453 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 RANBP17Q9H2T7 1088 aaKnown RBP19.49■□□□□ 0.71
CCM2-205ENST00000472223 SLC38A10Q9HBR0 1119 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 ORC3Q9UBD5 711 aaPredicted RBP19.49■□□□□ 0.71
CCM2-205ENST00000472223 RABGAP1Q9Y3P9 1069 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 MYH6P13533 1939 aa19.49■□□□□ 0.71
CCM2-205ENST00000472223 PTPDC1A2A3K4 754 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 SLC4A3P48751 1232 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 CCNA1P78396 465 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 CUL4AQ13619 759 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 TRIM29Q14134 588 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 NTRK3Q16288 839 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 NBPF11Q86T75 865 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 FBXO11Q86XK2 927 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 ZIC5Q96T25 663 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 CNTNAP5Q8WYK1 1306 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
CCM2-205ENST00000472223 BAZ2BQ9UIF8 2168 aaKnown RBP19.47■□□□□ 0.71
CCM2-205ENST00000472223 hCG_1984214I3L0E3 225 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 CA12O43570 354 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 CYTH3O43739 400 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 COPB2P35606 906 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 QRICH1Q2TAL8 776 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 ZNF713Q8N859 430 aaPredicted RBP19.47■□□□□ 0.71
CCM2-205ENST00000472223 GPRC5AQ8NFJ5 357 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 CCDC12Q8WUD4 166 aaPredicted RBP19.47■□□□□ 0.71
CCM2-205ENST00000472223 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 CWC22Q9HCG8 908 aaKnown RBP19.47■□□□□ 0.71
CCM2-205ENST00000472223 CCPG1Q9ULG6 757 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 ADAMTS5Q9UNA0 930 aa19.47■□□□□ 0.71
CCM2-205ENST00000472223 ICAM1P05362 532 aa19.46■□□□□ 0.71
CCM2-205ENST00000472223 STAT3P40763 770 aa19.46■□□□□ 0.71
CCM2-205ENST00000472223 SNAP25P60880 206 aa19.46■□□□□ 0.71
CCM2-205ENST00000472223 HEATR3Q7Z4Q2 680 aa19.46■□□□□ 0.71
CCM2-205ENST00000472223 NSUN7Q8NE18 718 aaKnown RBP19.46■□□□□ 0.71
CCM2-205ENST00000472223 TEX13BQ9BXU2 312 aa19.46■□□□□ 0.71
CCM2-205ENST00000472223 PARP14Q460N5 1801 aa19.46■□□□□ 0.71
CCM2-205ENST00000472223 hCG_1642624A0A1W2PR95 340 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 TLR2O60603 784 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 SLC25A27O95847 323 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 SCG2P13521 617 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 FUT2Q10981 343 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 PFKFB3Q16875 520 aaPredicted RBP19.45■□□□□ 0.7
CCM2-205ENST00000472223 TKFCQ3LXA3 575 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 ANKRD13CQ8N6S4 541 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 MTMR8Q96EF0 704 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
CCM2-205ENST00000472223 MRPL11Q9Y3B7 192 aaKnown RBP19.45■□□□□ 0.7
CCM2-205ENST00000472223 PCDHA1Q9Y5I3 950 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 ABCB11O95342 1321 aa19.45■□□□□ 0.7
CCM2-205ENST00000472223 ATP2A1O14983 1001 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 PPFIA3O75145 1194 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 CTDNEP1O95476 244 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 TMEM132BQ14DG7 1078 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 USH1GQ495M9 461 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 SNRNP48Q6IEG0 339 aaKnown RBP19.44■□□□□ 0.7
CCM2-205ENST00000472223 CCDC148Q8NFR7 591 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 SMARCC2Q8TAQ2 1214 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 FOXD4L1Q9NU39 408 aa19.44■□□□□ 0.7
CCM2-205ENST00000472223 JAK2O60674 1132 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 TRPA1O75762 1119 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 ALAS1P13196 640 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 PDCP20941 246 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 GJB2P29033 226 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 NAPAP54920 295 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 ERVK-9P63128 1117 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 ERVK-24P63145 666 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 CRHR2Q13324 411 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 FAM110CQ1W6H9 321 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 FAM177A1Q8N128 213 aaPredicted RBP19.43■□□□□ 0.7
CCM2-205ENST00000472223 ALG1Q9BT22 464 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 GLT8D2Q9H1C3 349 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 RNF186Q9NXI6 227 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 RBPJLQ9UBG7 517 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 FBXO40Q9UH90 709 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 CPA4Q9UI42 421 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 RLFQ13129 1914 aa19.43■□□□□ 0.7
CCM2-205ENST00000472223 COL11A1P12107 1806 aaPredicted RBP19.42■□□□□ 0.7
CCM2-205ENST00000472223 ST3GAL1Q11201 340 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 WDR78Q5VTH9 848 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 NCAPG2Q86XI2 1143 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 MCF2L2Q86YR7 1114 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 SPRYD3Q8NCJ5 442 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 AGBL1Q96MI9 1066 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 MROH8Q9H579 483 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 SH3GLB2Q9NR46 395 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 SAGE1Q9NXZ1 904 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 BARHL2Q9NY43 387 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 BTBD7Q9P203 1132 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 MORF4L1Q9UBU8 362 aa19.42■□□□□ 0.7
CCM2-205ENST00000472223 H3BQV1 296 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 PDIA4P13667 645 aaKnown RBP19.41■□□□□ 0.7
CCM2-205ENST00000472223 NLRP5P59047 1200 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 KIF22Q14807 665 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 SLC35G1Q2M3R5 365 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 IFFO2Q5TF58 517 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 PPP1R18Q6NYC8 613 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 RIOX2Q8IUF8 465 aa19.41■□□□□ 0.7
CCM2-205ENST00000472223 CHST13Q8NET6 341 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms