RNA–Protein interactions for RNA: ENST00000472216.2

SPC25-203, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 754 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-203ENST00000472216 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
SPC25-203ENST00000472216 FAM184BQ9ULE4 1060 aa12.39□□□□□ -0.43
SPC25-203ENST00000472216 TIMELESSQ9UNS1 1208 aa12.39□□□□□ -0.43
SPC25-203ENST00000472216 CNPY2Q9Y2B0 182 aa12.39□□□□□ -0.43
SPC25-203ENST00000472216 MYO7AQ13402 2215 aa12.39□□□□□ -0.43
SPC25-203ENST00000472216 LAMA5O15230 3695 aa12.39□□□□□ -0.43
SPC25-203ENST00000472216 ATF7P17544 494 aaPredicted RBP12.38□□□□□ -0.43
SPC25-203ENST00000472216 RGS3P49796 1198 aa12.38□□□□□ -0.43
SPC25-203ENST00000472216 ITGA7Q13683 1181 aa12.38□□□□□ -0.43
SPC25-203ENST00000472216 SH3BP5LQ7L8J4 393 aa12.38□□□□□ -0.43
SPC25-203ENST00000472216 TINF2Q9BSI4 451 aa12.38□□□□□ -0.43
SPC25-203ENST00000472216 BTBD7Q9P203 1132 aa12.38□□□□□ -0.43
SPC25-203ENST00000472216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.37□□□□□ -0.43
SPC25-203ENST00000472216 DDTLA6NHG4 134 aaPredicted RBP12.37□□□□□ -0.43
SPC25-203ENST00000472216 USP17L10C9JJH3 530 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 LINC01565O15544 149 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 SP9P0CG40 484 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 TGM1P22735 817 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 CAP2P40123 477 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 ABRAQ8N0Z2 381 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 ZCCHC14Q8WYQ9 949 aaKnown RBP12.37□□□□□ -0.43
SPC25-203ENST00000472216 FAM84BQ96KN1 310 aaPredicted RBP12.37□□□□□ -0.43
SPC25-203ENST00000472216 BBC3Q96PG8 261 aaPredicted RBP12.37□□□□□ -0.43
SPC25-203ENST00000472216 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
SPC25-203ENST00000472216 SIL1Q9H173 461 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 INSL6Q9Y581 213 aa12.37□□□□□ -0.43
SPC25-203ENST00000472216 CABYRO75952 493 aa12.36□□□□□ -0.43
SPC25-203ENST00000472216 POTEHQ6S545 545 aa12.36□□□□□ -0.43
SPC25-203ENST00000472216 VPS37DQ86XT2 251 aa12.36□□□□□ -0.43
SPC25-203ENST00000472216 SRPK3Q9UPE1 567 aa12.36□□□□□ -0.43
SPC25-203ENST00000472216 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
SPC25-203ENST00000472216 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
SPC25-203ENST00000472216 DOCK2Q92608 1830 aa12.36□□□□□ -0.43
SPC25-203ENST00000472216 COL11A1P12107 1806 aaPredicted RBP12.35□□□□□ -0.43
SPC25-203ENST00000472216 ZNF236Q9UL36 1845 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L20D6RJB6 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 PLIN1O60240 522 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 SUPT20HL2P0C7V6 817 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 PLA2G2AP14555 144 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 GTF2F1P35269 517 aaKnown RBP eCLIP12.35□□□□□ -0.43
SPC25-203ENST00000472216 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
SPC25-203ENST00000472216 DEFB103AP81534 67 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 GOLGA2Q08379 1002 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 USP17L24Q0WX57 530 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
SPC25-203ENST00000472216 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 HYPKQ9NX55 129 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
SPC25-203ENST00000472216 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
SPC25-203ENST00000472216 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
SPC25-203ENST00000472216 RETREG2Q8NC44 543 aa12.34□□□□□ -0.43
SPC25-203ENST00000472216 CDCA7LQ96GN5 454 aa12.34□□□□□ -0.43
SPC25-203ENST00000472216 MOV10L1Q9BXT6 1211 aaKnown RBP12.34□□□□□ -0.43
SPC25-203ENST00000472216 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
SPC25-203ENST00000472216 IQCF3P0C7M6 154 aa12.33□□□□□ -0.44
SPC25-203ENST00000472216 CYP2C9P11712 490 aa12.33□□□□□ -0.44
SPC25-203ENST00000472216 NPR3P17342 541 aa12.33□□□□□ -0.44
SPC25-203ENST00000472216 ERCC3P19447 782 aa12.33□□□□□ -0.44
SPC25-203ENST00000472216 GJA9P57773 515 aa12.33□□□□□ -0.44
SPC25-203ENST00000472216 TMEM121BQ9BXQ6 578 aaPredicted RBP12.33□□□□□ -0.44
SPC25-203ENST00000472216 KALRNO60229 2985 aa12.33□□□□□ -0.44
SPC25-203ENST00000472216 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 FAM196BA6NMK8 535 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 SPTLC1O15269 473 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 ARP10275 920 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 SRSF1Q07955 248 aaKnown RBP eCLIP12.32□□□□□ -0.44
SPC25-203ENST00000472216 UBE4AQ14139 1066 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 IL31Q6EBC2 164 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 CXCL17Q6UXB2 119 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 LMAN2LQ9H0V9 348 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 UPF3AQ9H1J1 476 aaKnown RBP12.32□□□□□ -0.44
SPC25-203ENST00000472216 EMILIN3Q9NT22 766 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 ADAMTS20P59510 1910 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 SCN5AQ14524 2016 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 FANCMQ8IYD8 2048 aa12.32□□□□□ -0.44
SPC25-203ENST00000472216 FCER1AP12319 257 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 USP17L2Q6R6M4 530 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 CATSPERGQ6ZRH7 1159 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 ZNF605Q86T29 641 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 TMEM192Q8IY95 271 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 MROH8Q9H579 483 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 PARD6AQ9NPB6 346 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
SPC25-203ENST00000472216 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
SPC25-203ENST00000472216 GRIN2DO15399 1336 aa12.31□□□□□ -0.44
SPC25-203ENST00000472216 SPTAN1Q13813 2472 aaKnown RBP12.31□□□□□ -0.44
SPC25-203ENST00000472216 ITPR3Q14573 2671 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms