RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 NCOA7Q8NI08 942 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 HOMER2Q9NSB8 354 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 ZSWIM5Q9P217 1185 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 ADD3Q9UEY8 706 aaKnown RBP9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 FAM184BQ9ULE4 1060 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 CCPG1Q9ULG6 757 aa9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 GREB1LQ9C091 1923 aaPredicted RBP9.8□□□□□ -0.84
TSPAN1-205ENST00000472170 FOXP2O15409 715 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 ICAM1P05362 532 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 PARP1P09874 1014 aaKnown RBP9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 AKR1A1P14550 325 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 GSPT1P15170 499 aaKnown RBP9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 NOVP48745 357 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 ZNF792Q3KQV3 632 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 NOL8Q76FK4 1167 aaKnown RBP9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 ZNF467Q7Z7K2 595 aaPredicted RBP9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 TMTC2Q8N394 836 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 PNMA1Q8ND90 353 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 SENP6Q9GZR1 1112 aaPredicted RBP9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 ABHD16BQ9H3Z7 469 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 RNF146Q9NTX7 359 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 FLRT1Q9NZU1 646 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 RLFQ13129 1914 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 FRMPD2Q68DX3 1309 aaPredicted RBP9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 SYNGAP1Q96PV0 1343 aa9.79□□□□□ -0.84
TSPAN1-205ENST00000472170 H0YGN5 161 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 DNM1LO00429 736 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 IFIT3O14879 490 aaKnown RBP9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 SGSM2O43147 1006 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 PDHBP11177 359 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 CYBAP13498 195 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 SLC16A2P36021 539 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 ASPRV1Q53RT3 343 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 LHX8Q68G74 356 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 BTNL9Q6UXG8 535 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 NSMFQ6X4W1 530 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 TBC1D10CQ8IV04 446 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 ANKS1AQ92625 1134 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 AGBL1Q96MI9 1066 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 MAF1Q9H063 256 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 XPNPEP3Q9NQH7 507 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 ZHX1Q9UKY1 873 aaPredicted RBP9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 RIPK3Q9Y572 518 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 HTTP42858 3142 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 CENPFP49454 3210 aa9.78□□□□□ -0.84
TSPAN1-205ENST00000472170 PARP14Q460N5 1801 aa9.77□□□□□ -0.84
TSPAN1-205ENST00000472170 PTPDC1A2A3K4 754 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 ZEB2O60315 1214 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 ZNF543Q08ER8 600 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 ACVR2BQ13705 512 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 WTAPQ15007 396 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 BMP2KLQ5H9B9 411 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 PRAMEF19Q5SWL8 479 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 TTBK2Q6IQ55 1244 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 MAMDC4Q6UXC1 1216 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 SYNE3Q6ZMZ3 975 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 MCF2L2Q86YR7 1114 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 PCSK9Q8NBP7 692 aaKnown RBP9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 NUP133Q8WUM0 1156 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 MAP4K1Q92918 833 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 RANBP17Q9H2T7 1088 aaKnown RBP9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 VAT1LQ9HCJ6 419 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 TNKSO95271 1327 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 NEDD4P46934 1319 aa9.77□□□□□ -0.85
TSPAN1-205ENST00000472170 PLXNA1Q9UIW2 1896 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 LOC102724159A0A0B4J2E5 919 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 PWP2Q15269 919 aaKnown RBP9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 BRDTQ58F21 947 aaPredicted RBP9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 GJC2Q5T442 439 aaPredicted RBP9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 RNF207Q6ZRF8 634 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 UBE2Q1Q7Z7E8 422 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 C7orf61Q8IZ16 206 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 LBHD1Q9BQE6 289 aaPredicted RBP9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 AP5M1Q9H0R1 490 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 ANO2Q9NQ90 1003 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 MRPL11Q9Y3B7 192 aaKnown RBP9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 ZNF236Q9UL36 1845 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 SMCHD1A6NHR9 2005 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 A0A0G2JMZ2 1700 aa9.76□□□□□ -0.85
TSPAN1-205ENST00000472170 DNAJC25-GNG10A0A024R161 153 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 CCDC69A6NI79 296 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 E7EWF7 191 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 DUSP11O75319 330 aaKnown RBP9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 CYP21A2P08686 494 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 GOLGA8HP0CJ92 632 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 SNHG28P0DPA3 235 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 CALML3P27482 149 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 KIF5BP33176 963 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 MCM5P33992 734 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 SNAP25P60880 206 aa9.75□□□□□ -0.85
TSPAN1-205ENST00000472170 PTH1RQ03431 593 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms