RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF589Q86UQ0 364 aaPredicted RBP26.66■■□□□ 1.86
C9orf3-213ENST00000471978 CHD1LQ86WJ1 897 aa26.66■■□□□ 1.86
C9orf3-213ENST00000471978 EXOC6Q8TAG9 804 aa26.66■■□□□ 1.86
C9orf3-213ENST00000471978 LENG1Q96BZ8 264 aaPredicted RBP26.66■■□□□ 1.86
C9orf3-213ENST00000471978 ZHX1Q9UKY1 873 aaPredicted RBP26.66■■□□□ 1.86
C9orf3-213ENST00000471978 LAMA2P24043 3122 aaKnown RBP26.65■■□□□ 1.86
C9orf3-213ENST00000471978 RRP12Q5JTH9 1297 aaKnown RBP26.65■■□□□ 1.86
C9orf3-213ENST00000471978 AGBL1Q96MI9 1066 aa26.65■■□□□ 1.86
C9orf3-213ENST00000471978 ACAD9Q9H845 621 aa26.65■■□□□ 1.86
C9orf3-213ENST00000471978 FAM184BQ9ULE4 1060 aa26.65■■□□□ 1.86
C9orf3-213ENST00000471978 MTMR7Q9Y216 660 aa26.65■■□□□ 1.86
C9orf3-213ENST00000471978 CCDC171Q6TFL3 1326 aa26.65■■□□□ 1.86
C9orf3-213ENST00000471978 NOVP48745 357 aa26.64■■□□□ 1.86
C9orf3-213ENST00000471978 NUCB1Q02818 461 aa26.64■■□□□ 1.86
C9orf3-213ENST00000471978 RASGRP2Q7LDG7 609 aa26.64■■□□□ 1.86
C9orf3-213ENST00000471978 ZNF536O15090 1300 aa26.64■■□□□ 1.85
C9orf3-213ENST00000471978 ZMYM6O95789 1325 aa26.64■■□□□ 1.85
C9orf3-213ENST00000471978 C1orf53Q5VUE5 145 aa26.63■■□□□ 1.85
C9orf3-213ENST00000471978 PLEKHM2Q8IWE5 1019 aa26.63■■□□□ 1.85
C9orf3-213ENST00000471978 FGD4Q96M96 766 aa26.63■■□□□ 1.85
C9orf3-213ENST00000471978 PRDM5Q9NQX1 630 aaPredicted RBP26.63■■□□□ 1.85
C9orf3-213ENST00000471978 RNF146Q9NTX7 359 aa26.63■■□□□ 1.85
C9orf3-213ENST00000471978 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.63■■□□□ 1.85
C9orf3-213ENST00000471978 PRR12Q9ULL5 1215 aa26.63■■□□□ 1.85
C9orf3-213ENST00000471978 ADAMTS4O75173 837 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 SDSP20132 328 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 SNAP25P60880 206 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 HAND2P61296 217 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 ACVR2BQ13705 512 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 CCDC96Q2M329 555 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 TKFCQ3LXA3 575 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 GPR153Q6NV75 609 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 CCDC174Q6PII3 467 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 OSBPL3Q9H4L5 887 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 SYNRGQ9UMZ2 1314 aa26.62■■□□□ 1.85
C9orf3-213ENST00000471978 MFAP1P55081 439 aaKnown RBP26.61■■□□□ 1.85
C9orf3-213ENST00000471978 ARMCX2Q7L311 632 aa26.61■■□□□ 1.85
C9orf3-213ENST00000471978 DCAF4Q8WV16 495 aa26.61■■□□□ 1.85
C9orf3-213ENST00000471978 TRERF1Q96PN7 1200 aa26.61■■□□□ 1.85
C9orf3-213ENST00000471978 ABHD16BQ9H3Z7 469 aa26.61■■□□□ 1.85
C9orf3-213ENST00000471978 A0A1W2PQ45 241 aaPredicted RBP26.6■■□□□ 1.85
C9orf3-213ENST00000471978 A0A1W2PQY0 241 aa26.6■■□□□ 1.85
C9orf3-213ENST00000471978 POTEB2H3BUK9 544 aa26.6■■□□□ 1.85
C9orf3-213ENST00000471978 ALAS1P13196 640 aa26.6■■□□□ 1.85
C9orf3-213ENST00000471978 CNTN2Q02246 1040 aa26.6■■□□□ 1.85
C9orf3-213ENST00000471978 TSEN34Q9BSV6 310 aaKnown RBP26.6■■□□□ 1.85
C9orf3-213ENST00000471978 A1CFQ9NQ94 594 aaKnown RBP26.6■■□□□ 1.85
C9orf3-213ENST00000471978 TCP11L1Q9NUJ3 509 aa26.6■■□□□ 1.85
C9orf3-213ENST00000471978 DUSP11O75319 330 aaKnown RBP26.59■■□□□ 1.85
C9orf3-213ENST00000471978 TOP1P11387 765 aaKnown RBP26.59■■□□□ 1.85
C9orf3-213ENST00000471978 TLE2Q04725 743 aa26.59■■□□□ 1.85
C9orf3-213ENST00000471978 MFSD6Q6ZSS7 791 aa26.59■■□□□ 1.85
C9orf3-213ENST00000471978 CCDC144CPQ8IYA2 1237 aa26.59■■□□□ 1.85
C9orf3-213ENST00000471978 FAM133AQ8N9E0 248 aa26.59■■□□□ 1.85
C9orf3-213ENST00000471978 TMEM47Q9BQJ4 181 aa26.59■■□□□ 1.85
C9orf3-213ENST00000471978 PDLIM7Q9NR12 457 aa26.59■■□□□ 1.85
C9orf3-213ENST00000471978 COL6A3P12111 3177 aa26.58■■□□□ 1.85
C9orf3-213ENST00000471978 ACLYP53396 1101 aa26.58■■□□□ 1.85
C9orf3-213ENST00000471978 CCDC144BQ3MJ40 725 aa26.58■■□□□ 1.85
C9orf3-213ENST00000471978 AKNAD1Q5T1N1 836 aa26.58■■□□□ 1.85
C9orf3-213ENST00000471978 SH3RF1Q7Z6J0 888 aa26.58■■□□□ 1.85
C9orf3-213ENST00000471978 KLHDC9Q8NEP7 349 aa26.58■■□□□ 1.85
C9orf3-213ENST00000471978 LTBP2Q14767 1821 aa26.58■■□□□ 1.84
C9orf3-213ENST00000471978 TRIM43BA6NCK2 446 aa26.57■■□□□ 1.84
C9orf3-213ENST00000471978 PCP11498 1178 aaKnown RBP26.57■■□□□ 1.84
C9orf3-213ENST00000471978 KCNA10Q16322 511 aa26.57■■□□□ 1.84
C9orf3-213ENST00000471978 TTBK2Q6IQ55 1244 aa26.57■■□□□ 1.84
C9orf3-213ENST00000471978 DEFB123Q8N688 67 aa26.57■■□□□ 1.84
C9orf3-213ENST00000471978 BADQ92934 168 aa26.57■■□□□ 1.84
C9orf3-213ENST00000471978 TRIM43Q96BQ3 446 aaPredicted RBP26.57■■□□□ 1.84
C9orf3-213ENST00000471978 CCPG1Q9ULG6 757 aa26.57■■□□□ 1.84
C9orf3-213ENST00000471978 SOWAHBA6NEL2 793 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 MOXD2PA6NHM9 499 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 ADCY6O43306 1168 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 SLC16A2P36021 539 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 MUM1L1Q5H9M0 696 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 CWC27Q6UX04 472 aaKnown RBP26.56■■□□□ 1.84
C9orf3-213ENST00000471978 TBC1D10CQ8IV04 446 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 NUP133Q8WUM0 1156 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 STARD7Q9NQZ5 370 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 DIAPH3Q9NSV4 1193 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 MCM3APO60318 1980 aa26.56■■□□□ 1.84
C9orf3-213ENST00000471978 MYADML2A6NDP7 307 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 PQBP1O60828 265 aaKnown RBP26.55■■□□□ 1.84
C9orf3-213ENST00000471978 ICAM1P05362 532 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 CLTBP09497 229 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 C6orf222P0C671 652 aaPredicted RBP26.55■■□□□ 1.84
C9orf3-213ENST00000471978 SYDE2Q5VT97 1194 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 CCSAPQ6IQ19 270 aaPredicted RBP26.55■■□□□ 1.84
C9orf3-213ENST00000471978 BTNL9Q6UXG8 535 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 Q7L0L9 218 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 TTC14Q96N46 770 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 KATNBL1Q9H079 304 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 RANBP17Q9H2T7 1088 aaKnown RBP26.55■■□□□ 1.84
C9orf3-213ENST00000471978 RNF41Q9H4P4 317 aaPredicted RBP26.55■■□□□ 1.84
C9orf3-213ENST00000471978 SPC25Q9HBM1 224 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 GPCPD1Q9NPB8 672 aa26.55■■□□□ 1.84
C9orf3-213ENST00000471978 FRMPD2Q68DX3 1309 aaPredicted RBP26.55■■□□□ 1.84
C9orf3-213ENST00000471978 ASB14A6NK59 587 aa26.54■■□□□ 1.84
C9orf3-213ENST00000471978 CYP39A1Q9NYL5 469 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms