RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 FBXO40Q9UH90 709 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 CCPG1Q9ULG6 757 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 TNKSO95271 1327 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 TRIOBPQ9H2D6 2365 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 LCTP09848 1927 aa17.37■□□□□ 0.37
SSR4-208ENST00000471880 CYP21A2P08686 494 aa17.36■□□□□ 0.37
SSR4-208ENST00000471880 PDHBP11177 359 aa17.36■□□□□ 0.37
SSR4-208ENST00000471880 IFIT1BQ5T764 474 aaKnown RBP17.36■□□□□ 0.37
SSR4-208ENST00000471880 NECAB2Q7Z6G3 386 aa17.36■□□□□ 0.37
SSR4-208ENST00000471880 DGKHQ86XP1 1220 aa17.36■□□□□ 0.37
SSR4-208ENST00000471880 ACAD9Q9H845 621 aa17.36■□□□□ 0.37
SSR4-208ENST00000471880 RBM8AQ9Y5S9 174 aaKnown RBP17.36■□□□□ 0.37
SSR4-208ENST00000471880 ERICH2A1L162 156 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 ATP2A1O14983 1001 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 TAL1P17542 331 aaPredicted RBP17.35■□□□□ 0.37
SSR4-208ENST00000471880 NOVP48745 357 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 NT5C2P49902 561 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 ENAHQ8N8S7 591 aaPredicted RBP17.35■□□□□ 0.37
SSR4-208ENST00000471880 TRPV1Q8NER1 839 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 CHST13Q8NET6 341 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 ESYT1Q9BSJ8 1104 aa17.35■□□□□ 0.37
SSR4-208ENST00000471880 DDX20Q9UHI6 824 aaKnown RBP17.35■□□□□ 0.37
SSR4-208ENST00000471880 E7EWF7 191 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 PLA2G6O60733 806 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 NSMFQ6X4W1 530 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 CYB5R4Q7L1T6 521 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 CHST3Q7LGC8 479 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 TINF2Q9BSI4 451 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 CNPY2Q9Y2B0 182 aa17.34■□□□□ 0.37
SSR4-208ENST00000471880 IFIT3O14879 490 aaKnown RBP17.33■□□□□ 0.36
SSR4-208ENST00000471880 CYBAP13498 195 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 SART3Q15020 963 aaKnown RBP17.33■□□□□ 0.36
SSR4-208ENST00000471880 ZNF792Q3KQV3 632 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 GPATCH4Q5T3I0 446 aaKnown RBP17.33■□□□□ 0.36
SSR4-208ENST00000471880 ANKLE1Q8NAG6 615 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 CPVLQ9H3G5 476 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 C11orf49Q9H6J7 331 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.36
SSR4-208ENST00000471880 OGDHLQ9ULD0 1010 aa17.33■□□□□ 0.36
SSR4-208ENST00000471880 ZNF536O15090 1300 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 POTEB2H3BUK9 544 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 EVI5O60447 810 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 MSCO60682 206 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 CDC45O75419 566 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
SSR4-208ENST00000471880 CAPN2P17655 700 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 TKFCQ3LXA3 575 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 USH1GQ495M9 461 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 LHX8Q68G74 356 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 MAP4K1Q92918 833 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 VAT1LQ9HCJ6 419 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 TAF6LQ9Y6J9 622 aa17.32■□□□□ 0.36
SSR4-208ENST00000471880 MYH6P13533 1939 aa17.31■□□□□ 0.36
SSR4-208ENST00000471880 H0YGN5 161 aa17.31■□□□□ 0.36
SSR4-208ENST00000471880 ICAM1P05362 532 aa17.31■□□□□ 0.36
SSR4-208ENST00000471880 MUM1L1Q5H9M0 696 aa17.31■□□□□ 0.36
SSR4-208ENST00000471880 BTNL9Q6UXG8 535 aa17.31■□□□□ 0.36
SSR4-208ENST00000471880 RANBP17Q9H2T7 1088 aaKnown RBP17.31■□□□□ 0.36
SSR4-208ENST00000471880 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
SSR4-208ENST00000471880 PCDH10Q9P2E7 1040 aa17.31■□□□□ 0.36
SSR4-208ENST00000471880 DIS3Q9Y2L1 958 aaKnown RBP17.31■□□□□ 0.36
SSR4-208ENST00000471880 PTPDC1A2A3K4 754 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 SEPT4O43236 478 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 WTAPQ15007 396 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 TMEM67Q5HYA8 995 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 STOX1Q6ZVD7 989 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 LSG1Q9H089 658 aaKnown RBP17.3■□□□□ 0.36
SSR4-208ENST00000471880 NR2E3Q9Y5X4 410 aa17.3■□□□□ 0.36
SSR4-208ENST00000471880 PFASO15067 1338 aa17.29■□□□□ 0.36
SSR4-208ENST00000471880 KBTBD13C9JR72 458 aa17.29■□□□□ 0.36
SSR4-208ENST00000471880 SNHG28P0DPA3 235 aa17.29■□□□□ 0.36
SSR4-208ENST00000471880 RARBP10826 455 aa17.29■□□□□ 0.36
SSR4-208ENST00000471880 GJC2Q5T442 439 aaPredicted RBP17.29■□□□□ 0.36
SSR4-208ENST00000471880 C7orf61Q8IZ16 206 aa17.29■□□□□ 0.36
SSR4-208ENST00000471880 SENP6Q9GZR1 1112 aaPredicted RBP17.29■□□□□ 0.36
SSR4-208ENST00000471880 LRRC37A2A6NM11 1700 aa17.29■□□□□ 0.36
SSR4-208ENST00000471880 DNAJC25-GNG10A0A024R161 153 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 SLC27A2O14975 620 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 CALML3P27482 149 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 CDC37Q16543 378 aaPredicted RBP17.28■□□□□ 0.36
SSR4-208ENST00000471880 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 NFXL1Q6ZNB6 911 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 ANKS1AQ92625 1134 aa17.28■□□□□ 0.36
SSR4-208ENST00000471880 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
SSR4-208ENST00000471880 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.28■□□□□ 0.36
SSR4-208ENST00000471880 RANBP2P49792 3224 aaKnown RBP17.28■□□□□ 0.36
SSR4-208ENST00000471880 DNAH12Q6ZR08 3092 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 NFIBO00712 420 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 AKR1A1P14550 325 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 BAATQ14032 418 aaPredicted RBP17.27■□□□□ 0.36
SSR4-208ENST00000471880 SEC23AQ15436 765 aa17.27■□□□□ 0.36
SSR4-208ENST00000471880 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms