RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RAC1P63000 192 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 TMPRSS15P98073 1019 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 DENND5AQ6IQ26 1287 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 USP53Q70EK8 1073 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 SPATS2Q86XZ4 545 aaKnown RBP8.88□□□□□ -0.99
SMC5-202ENST00000471372 RNF141Q8WVD5 230 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 FBXL18Q96ME1 805 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 ZDHHC15Q96MV8 337 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 ASPNQ9BXN1 380 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 GFOD1Q9NXC2 390 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 ZIM2Q9NZV7 527 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 DIS3Q9Y2L1 958 aaKnown RBP8.88□□□□□ -0.99
SMC5-202ENST00000471372 PCDHA9Q9Y5H5 950 aa8.88□□□□□ -0.99
SMC5-202ENST00000471372 RAB6AP20340 208 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 GNALP38405 381 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 GRB10Q13322 594 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 PIK3R6Q5UE93 754 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 LYPD4Q6UWN0 246 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 MAMDC2Q7Z304 686 aaPredicted RBP8.87□□□□□ -0.99
SMC5-202ENST00000471372 EXOC8Q8IYI6 725 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 USP7Q93009 1102 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 RELTQ969Z4 430 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 TRIM11Q96F44 468 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 CCDC140Q96MF4 163 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 TTC1Q99614 292 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 YIPF4Q9BSR8 244 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 MYH16Q9H6N6 1097 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 ACSS3Q9H6R3 686 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 LGR6Q9HBX8 967 aa8.87□□□□□ -0.99
SMC5-202ENST00000471372 SCG5P05408 212 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 CELA2BP08218 269 aaPredicted RBP8.86□□□□□ -0.99
SMC5-202ENST00000471372 BPIP17213 487 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 FLT3P36888 993 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 DPY19L1Q2PZI1 675 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 ABHD17CQ6PCB6 329 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 KCNT2Q6UVM3 1135 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 C14orf80Q86SX3 495 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 PI4K2BQ8TCG2 481 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 CYP26B1Q9NR63 512 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 TRHDEQ9UKU6 1024 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 MINPP1Q9UNW1 487 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 DAGLAQ9Y4D2 1042 aa8.86□□□□□ -0.99
SMC5-202ENST00000471372 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.85□□□□□ -0.99
SMC5-202ENST00000471372 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 KIF3BO15066 747 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 APBA3O96018 575 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 CPP00450 1065 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 ETV3P41162 512 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 STYK1Q6J9G0 422 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 ZCCHC8Q6NZY4 707 aaKnown RBP8.85□□□□□ -0.99
SMC5-202ENST00000471372 IGF2-ASQ6U949 168 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 UBE2R2Q712K3 238 aaPredicted RBP8.85□□□□□ -0.99
SMC5-202ENST00000471372 TMC3Q7Z5M5 1100 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 CNTD1Q8N815 330 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 KREMEN2Q8NCW0 462 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 HOOK2Q96ED9 719 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 SCARF2Q96GP6 870 aaPredicted RBP8.85□□□□□ -0.99
SMC5-202ENST00000471372 PSMG3-AS1Q96PY0 264 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 PUS7LQ9H0K6 701 aaKnown RBP8.85□□□□□ -0.99
SMC5-202ENST00000471372 MRPL18Q9H0U6 180 aaKnown RBP8.85□□□□□ -0.99
SMC5-202ENST00000471372 IFT22Q9H7X7 185 aa8.85□□□□□ -0.99
SMC5-202ENST00000471372 H0Y8X5 98 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 M0R2C6 588 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 GABRDO14764 452 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 DYNC1LI2O43237 492 aaPredicted RBP8.84□□□□□ -0.99
SMC5-202ENST00000471372 EIF5BO60841 1220 aaKnown RBP8.84□□□□□ -0.99
SMC5-202ENST00000471372 KCNA6P17658 529 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 PREPP48147 710 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 RHBDL3P58872 404 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 AMPD2Q01433 879 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 SCRN1Q12765 414 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 GORABQ5T7V8 394 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 ANKRD34AQ69YU3 496 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 CDPF1Q6NVV7 123 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 CHPFQ8IZ52 775 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 MYO1HQ8N1T3 1032 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 OR2W6PQ8NHA6 318 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 WNK4Q96J92 1243 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 MCMBPQ9BTE3 642 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 DSCC1Q9BVC3 393 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 RTFDC1Q9BY42 306 aaPredicted RBP8.84□□□□□ -0.99
SMC5-202ENST00000471372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMC5-202ENST00000471372 RRAGCQ9HB90 399 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 CRTAC1Q9NQ79 661 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 AASDHPPTQ9NRN7 309 aa8.84□□□□□ -0.99
SMC5-202ENST00000471372 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
SMC5-202ENST00000471372 ZNF891A8MT65 544 aaPredicted RBP8.83□□□□□ -1
SMC5-202ENST00000471372 GUCY1A3Q02108 690 aa8.83□□□□□ -1
SMC5-202ENST00000471372 PIN1Q13526 163 aaPredicted RBP8.83□□□□□ -1
SMC5-202ENST00000471372 GPAT2Q6NUI2 795 aa8.83□□□□□ -1
SMC5-202ENST00000471372 MORC4Q8TE76 937 aa8.83□□□□□ -1
SMC5-202ENST00000471372 DCAF4Q8WV16 495 aa8.83□□□□□ -1
SMC5-202ENST00000471372 CDH19Q9H159 772 aa8.83□□□□□ -1
SMC5-202ENST00000471372 SEMA6CQ9H3T2 930 aa8.83□□□□□ -1
SMC5-202ENST00000471372 PRDM10Q9NQV6 1147 aa8.83□□□□□ -1
SMC5-202ENST00000471372 SAMD15Q9P1V8 674 aa8.83□□□□□ -1
SMC5-202ENST00000471372 SF3B6Q9Y3B4 125 aaKnown RBP8.83□□□□□ -1
SMC5-202ENST00000471372 PCDHA8Q9Y5H6 950 aa8.83□□□□□ -1
SMC5-202ENST00000471372 B4E1Z4 1266 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms