RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 MPP2Q14168 576 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 RTP5Q14D33 572 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 ZYXQ15942 572 aaKnown RBP4.26□□□□□ -1.73
UBXN4-206ENST00000470687 SEZ6Q53EL9 994 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 TMEM201Q5SNT2 666 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 ZNF654Q8IZM8 581 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 TP53I13Q8NBR0 393 aaPredicted RBP4.26□□□□□ -1.73
UBXN4-206ENST00000470687 MICAL1Q8TDZ2 1067 aa4.26□□□□□ -1.73
UBXN4-206ENST00000470687 SUV39H1O43463 412 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 AKAP8O43823 692 aaKnown RBP4.25□□□□□ -1.73
UBXN4-206ENST00000470687 HTR3BO95264 441 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 PDE4BQ07343 736 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 NAALADL2Q58DX5 795 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 OLFML2BQ68BL8 750 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 CCDC81Q6ZN84 652 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 KIAA0825Q8IV33 1275 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 IGDCC3Q8IVU1 814 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 MIR1-1HGQ9H1L0 117 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 REV1Q9UBZ9 1251 aa4.25□□□□□ -1.73
UBXN4-206ENST00000470687 SUPT16HQ9Y5B9 1047 aaKnown RBP4.25□□□□□ -1.73
UBXN4-206ENST00000470687 LTBP3Q9NS15 1303 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 UBOX5O94941 541 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 PNLIPP16233 465 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 POLR2BP30876 1174 aaKnown RBP4.24□□□□□ -1.73
UBXN4-206ENST00000470687 ETFBP38117 255 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 KIR2DL1P43626 348 aaPredicted RBP4.24□□□□□ -1.73
UBXN4-206ENST00000470687 KIR2DL2P43627 348 aaPredicted RBP4.24□□□□□ -1.73
UBXN4-206ENST00000470687 ERVFRD-1P60508 538 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 SLC43A3Q8NBI5 491 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 GPRASP2Q96D09 838 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 MAP6Q96JE9 813 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 PWWP2AQ96N64 755 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 C8orf37Q96NL8 207 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 GPR20Q99678 358 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 CNOT11Q9UKZ1 510 aaKnown RBP4.24□□□□□ -1.73
UBXN4-206ENST00000470687 ZNRF3Q9ULT6 936 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 EFR3BQ9Y2G0 817 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 PCDHB14Q9Y5E9 798 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 WIZO95785 1651 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 KIF21AQ7Z4S6 1674 aa4.24□□□□□ -1.73
UBXN4-206ENST00000470687 TOP2AP11388 1531 aaKnown RBP4.24□□□□□ -1.73
UBXN4-206ENST00000470687 MEIS3P2A8K0S8 358 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 ABLIM1O14639 778 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 TNFRSF1AP19438 455 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 LMNB1P20700 586 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 RPL10P27635 214 aaKnown RBP4.23□□□□□ -1.73
UBXN4-206ENST00000470687 GIPRP48546 466 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 NASPP49321 788 aaPredicted RBP4.23□□□□□ -1.73
UBXN4-206ENST00000470687 KRTAP1-1Q07627 177 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 SLC14A2Q15849 920 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 SNAP47Q5SQN1 464 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 RNF111Q6ZNA4 994 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 GK5Q6ZS86 529 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 CEP128Q6ZU80 1094 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 LDHDQ86WU2 507 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 LSRQ86X29 649 aaPredicted RBP4.23□□□□□ -1.73
UBXN4-206ENST00000470687 TMEM192Q8IY95 271 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 RBBP8NLQ8NC74 664 aaPredicted RBP4.23□□□□□ -1.73
UBXN4-206ENST00000470687 NKD1Q969G9 470 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 ATG4CQ96DT6 458 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 SLC9A7Q96T83 725 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 CAPN10Q9HC96 672 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 ZMYM5Q9UJ78 669 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 IFT140Q96RY7 1462 aa4.23□□□□□ -1.73
UBXN4-206ENST00000470687 K7ESM1 405 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 FFAR3O14843 346 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 KLF4O43474 513 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 RLBP1P12271 317 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 YARSP54577 528 aaKnown RBP4.22□□□□□ -1.73
UBXN4-206ENST00000470687 APOBRQ0VD83 1088 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 CLEC16AQ2KHT3 1053 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 ZFYVE27Q5T4F4 411 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 OVOS1Q6IE37 1185 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 TMC6Q7Z403 805 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 WAPLQ7Z5K2 1190 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 PPFIBP1Q86W92 1011 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 REXO1Q8N1G1 1221 aaKnown RBP4.22□□□□□ -1.73
UBXN4-206ENST00000470687 ZNF513Q8N8E2 541 aaPredicted RBP4.22□□□□□ -1.73
UBXN4-206ENST00000470687 FAM13CQ8NE31 585 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 HHIPL1Q96JK4 782 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 KREMEN1Q96MU8 473 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 PLCD4Q9BRC7 762 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 ASPNQ9BXN1 380 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 KLHL14Q9P2G3 628 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 PALD1Q9ULE6 856 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 PCDHA5Q9Y5H7 936 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 ROBO2Q9HCK4 1378 aa4.22□□□□□ -1.73
UBXN4-206ENST00000470687 TMEM82A0PJX8 343 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 SHOXO15266 292 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 KCNC1P48547 511 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 CEBPAP49715 358 aaPredicted RBP4.21□□□□□ -1.74
UBXN4-206ENST00000470687 SLURP1P55000 103 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 ZXDAP98168 799 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 CAP1Q01518 475 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 PWP1Q13610 501 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 ZNF827Q17R98 1081 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 CDCP2Q5VXM1 449 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 SLFN12Q8IYM2 578 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 USHBP1Q8N6Y0 703 aa4.21□□□□□ -1.74
UBXN4-206ENST00000470687 CELF2-AS1Q8N7Q2 184 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms