RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
NHLRC3-203ENST00000470258 AMOTL2Q9Y2J4 779 aa10.61□□□□□ -0.71
NHLRC3-203ENST00000470258 ATXN2Q99700 1313 aaKnown RBP10.61□□□□□ -0.71
NHLRC3-203ENST00000470258 ERCC3P19447 782 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 IL15P40933 162 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 MYO1EQ12965 1108 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 OSBPL9Q96SU4 736 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 FAM217BQ9NTX9 383 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 ANO9A1A5B4 782 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 TMCO5BA8MYB1 307 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 HEXIM1O94992 359 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 PLEKP08567 350 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 TMOD1P28289 359 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 MRPL12P52815 198 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 PPP1R7Q15435 360 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 TYW1BQ6NUM6 668 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 YTHDF3Q7Z739 585 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 PNMA8AQ86V59 439 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 ZNF579Q8NAF0 562 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 KIF9Q9HAQ2 790 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 KDM6AO15550 1401 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 USO1O60763 962 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 FMNL1O95466 1100 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 CTDSPL2Q05D32 466 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 RTN1Q16799 776 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 RABL6Q3YEC7 729 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 HIBCHQ6NVY1 386 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 IFT20Q8IY31 132 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 FNBP4Q8N3X1 1017 aaPredicted RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 OR2W6PQ8NHA6 318 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 ATP6V1G3Q96LB4 118 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 IFIH1Q9BYX4 1025 aaKnown RBP10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 RWDD2AQ9UIY3 292 aa10.6□□□□□ -0.71
NHLRC3-203ENST00000470258 ENO4A6NNW6 628 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 GLI1P08151 1106 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 MAP2K1Q02750 393 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 CCDC50Q8IVM0 306 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 TRIM58Q8NG06 486 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 TCP11Q8WWU5 503 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 OSBPL7Q9BZF2 842 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 ACTR5Q9H9F9 607 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 LY9Q9HBG7 655 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 EIF4E1BA6NMX2 242 aaKnown RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 NUTM2BA6NNL0 878 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 NUTM2EB1AL46 878 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 EYA2O00167 538 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 BUB1O43683 1085 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 PRDM1O75626 825 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 ZFYP08048 801 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 CLTAP09496 248 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 PRCPP42785 496 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 IRX1P78414 480 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 PLCB4Q15147 1175 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 QPCTQ16769 361 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 CPLX4Q7Z7G2 160 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 MICAL1Q8TDZ2 1067 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 DNAJC7Q99615 494 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 FOXP1Q9H334 677 aaPredicted RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 PLAAQ9Y263 795 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 AKR1B10O60218 316 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 SLC8A1P32418 973 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 PAK2Q13177 524 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 TRADDQ15628 312 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 STAMBPL1Q96FJ0 436 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 ALS2CR12Q96Q35 445 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 AATFQ9NY61 560 aaKnown RBP eCLIP10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 CAPN11Q9UMQ6 739 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 HYOU1Q9Y4L1 999 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 ROBO1Q9Y6N7 1651 aa10.59□□□□□ -0.71
NHLRC3-203ENST00000470258 MRC1P22897 1456 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 XDHP47989 1333 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 EME2A4GXA9 379 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 LGALS16A8MUM7 142 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 SCTRP47872 440 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF790Q6PG37 636 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 CACNA2D3Q8IZS8 1091 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 CEP120Q8N960 986 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 IGDCC4Q8TDY8 1250 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 IP6K1Q92551 441 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 PLIN2Q99541 437 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 TOPAZ1Q8N9V7 1692 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 MAP3K15Q6ZN16 1313 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 GMNCA6NCL1 334 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 LRRC10BA6NIK2 292 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 ZKSCAN8Q15776 578 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 EARS2Q5JPH6 523 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 C2CD5Q86YS7 1000 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 ARMC2Q8NEN0 867 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 NSMCE1Q8WV22 266 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 CAVIN3Q969G5 261 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 TMEM87BQ96K49 555 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 CALR3Q96L12 384 aaKnown RBP10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 KRT12Q99456 494 aa10.58□□□□□ -0.72
NHLRC3-203ENST00000470258 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms