RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 POLR2DO15514 142 aaKnown RBP9.09□□□□□ -0.95
SMC4-212ENST00000470240 ZSCAN12O43309 604 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 KCNQ2O43526 872 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 DGAT1O75907 488 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 LDHBP07195 334 aaKnown RBP9.09□□□□□ -0.95
SMC4-212ENST00000470240 TPM1P09493 284 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 FGRP09769 529 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 ATP2B1P20020 1258 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 RFC4P35249 363 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 PIP4K2BP78356 416 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 MECOMQ03112 1051 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 FILIP1LQ4L180 1135 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 TTC38Q5R3I4 469 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 CTR9Q6PD62 1173 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 TMTC3Q6ZXV5 915 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 FCHSD1Q86WN1 690 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 CCAR2Q8N163 923 aaKnown RBP9.09□□□□□ -0.95
SMC4-212ENST00000470240 ANKRD20A12PQ8NF67 263 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 CELF1Q92879 486 aaKnown RBP9.09□□□□□ -0.95
SMC4-212ENST00000470240 NSUN4Q96CB9 384 aaKnown RBP9.09□□□□□ -0.95
SMC4-212ENST00000470240 MRGPRX2Q96LB1 330 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 C8orf37Q96NL8 207 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 VPS54Q9P1Q0 977 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 ANKIB1Q9P2G1 1089 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 PCDHA5Q9Y5H7 936 aa9.09□□□□□ -0.95
SMC4-212ENST00000470240 COL1A1P02452 1464 aaPredicted RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 CTIFO43310 598 aaKnown RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 SCG2P13521 617 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 GUCY1A2P33402 732 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 PLCD1P51178 756 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 DYNLL1P63167 89 aaKnown RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 CCZ1BP86790 482 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 CCZ1P86791 482 aaPredicted RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 LONRF3Q496Y0 759 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 GALNT17Q6IS24 598 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 ADGRA1Q86SQ6 560 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 METTL16Q86W50 562 aaKnown RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 HOMER1Q86YM7 354 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 CNBD1Q8NA66 436 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 ENOX1Q8TC92 643 aaKnown RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 RPGRQ92834 1020 aaKnown RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 CTAGE1Q96RT6 745 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 LZTS2Q9BRK4 669 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 MKNK2Q9HBH9 465 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 SH3GLB2Q9NR46 395 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 RMND1Q9NWS8 449 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 MCM9Q9NXL9 1143 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 CGNQ9P2M7 1197 aaKnown RBP9.08□□□□□ -0.96
SMC4-212ENST00000470240 MAN1B1Q9UKM7 699 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.08□□□□□ -0.962e-144■■■■■ 553.7
SMC4-212ENST00000470240 PCDHB6Q9Y5E3 794 aa9.08□□□□□ -0.96
SMC4-212ENST00000470240 XDHP47989 1333 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 CNTNAP5Q8WYK1 1306 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 A0A087WWV3 80 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 ST5P78524 1137 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 SKOR1P84550 965 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 NR5A1Q13285 461 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 GRAPQ13588 217 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 NCAPHQ15003 741 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 TMEM132AQ24JP5 1023 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 TRAPPC3LQ5T215 181 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 NT5DC1Q5TFE4 455 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 ISM2Q6H9L7 571 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 DGKHQ86XP1 1220 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 VSTM4Q8IW00 320 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 ZNF444Q8N0Y2 327 aaPredicted RBP9.07□□□□□ -0.96
SMC4-212ENST00000470240 IQUBQ8NA54 791 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 EHBP1Q8NDI1 1231 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 GRAPLQ8TC17 118 aaPredicted RBP9.07□□□□□ -0.96
SMC4-212ENST00000470240 CCDC12Q8WUD4 166 aaPredicted RBP9.07□□□□□ -0.96
SMC4-212ENST00000470240 CCDC47Q96A33 483 aaKnown RBP9.07□□□□□ -0.96
SMC4-212ENST00000470240 DHX58Q96C10 678 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 ERO1AQ96HE7 468 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 GSDMAQ96QA5 445 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 CCDC94Q9BW85 323 aaPredicted RBP9.07□□□□□ -0.96
SMC4-212ENST00000470240 GTPBP4Q9BZE4 634 aaKnown RBP9.07□□□□□ -0.96
SMC4-212ENST00000470240 CSRNP2Q9H175 543 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 TFCP2L1Q9NZI6 479 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 SERTAD1Q9UHV2 236 aa9.07□□□□□ -0.96
SMC4-212ENST00000470240 SPATA31A6Q5VVP1 1343 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 SYNRGQ9UMZ2 1314 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 NAV1Q8NEY1 1877 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 CCDC194A0A1B0GVG4 234 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 ARHGAP6O43182 974 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 PRDM1O75626 825 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TSPY3P0CV98 308 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TSPY8P0CW00 308 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 ATP2B4P23634 1241 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TOB1P50616 345 aaPredicted RBP9.06□□□□□ -0.96
SMC4-212ENST00000470240 SPAG1Q07617 926 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 TROAPQ12815 778 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 SEMA3FQ13275 785 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 STIM1Q13586 685 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 MORC3Q14149 939 aa9.06□□□□□ -0.96
SMC4-212ENST00000470240 PFKFB3Q16875 520 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms