RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 UBXN1Q04323 297 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 OR8K1Q8NGG5 319 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 RASGRP4Q8TDF6 673 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 CAPN11Q9UMQ6 739 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 EPN1Q9Y6I3 576 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-209ENST00000470026 NAV1Q8NEY1 1877 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 NDUFA10O95299 355 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 MEA1Q16626 185 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
BRCA1-209ENST00000470026 LRRC15Q8TF66 581 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 DHTKD1Q96HY7 919 aaPredicted RBP15.35■□□□□ 0.05
BRCA1-209ENST00000470026 CHP1Q99653 195 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 LZTS2Q9BRK4 669 aa15.35■□□□□ 0.05
BRCA1-209ENST00000470026 PUF60Q9UHX1 559 aaKnown RBP15.35■□□□□ 0.05
BRCA1-209ENST00000470026 RPS6KA4O75676 772 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 TUBBP07437 444 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 AK8Q96MA6 479 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 PNKPQ96T60 521 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 SETDB2Q96T68 719 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 TTYH3Q9C0H2 523 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 HAUS4Q9H6D7 363 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 MAPK8IP1Q9UQF2 711 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 PP2D1A8MPX8 630 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 PSMD14O00487 310 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 PSMA7O14818 248 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 SRGNP10124 158 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 INF2Q27J81 1249 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 COBLL1Q53SF7 1204 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 WDR59Q6PJI9 974 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 WDR66Q8TBY9 1149 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 L1RE1Q9UN81 338 aa15.34■□□□□ 0.05
BRCA1-209ENST00000470026 DDX60LQ5H9U9 1706 aaKnown RBP15.34■□□□□ 0.05
BRCA1-209ENST00000470026 TNRC6CQ9HCJ0 1690 aaKnown RBP15.33■□□□□ 0.04
BRCA1-209ENST00000470026 UBA7P41226 1012 aa15.33■□□□□ 0.04
BRCA1-209ENST00000470026 DNM2P50570 870 aa15.33■□□□□ 0.04
BRCA1-209ENST00000470026 STIM1Q13586 685 aa15.33■□□□□ 0.04
BRCA1-209ENST00000470026 NBPF5PQ86XG9 351 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-209ENST00000470026 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
BRCA1-209ENST00000470026 DUSP9Q99956 384 aaKnown RBP15.33■□□□□ 0.04
BRCA1-209ENST00000470026 SPZ1Q9BXG8 430 aa15.33■□□□□ 0.04
BRCA1-209ENST00000470026 ZSWIM4Q9H7M6 989 aa15.33■□□□□ 0.04
BRCA1-209ENST00000470026 CTAGE15A4D2H0 777 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 RASA1P20936 1047 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 TPTE2Q6XPS3 522 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 C15orf52Q6ZUT6 534 aaKnown RBP15.32■□□□□ 0.04
BRCA1-209ENST00000470026 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 TRAPPC11Q7Z392 1133 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 CTAGE6Q86UF2 777 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 RETREG2Q8NC44 543 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 PSD3Q9NYI0 1048 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 MYO6Q9UM54 1294 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 LUC7L2Q9Y383 392 aaKnown RBP15.32■□□□□ 0.04
BRCA1-209ENST00000470026 CDK5RAP2Q96SN8 1893 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 POLR3GO15318 223 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-209ENST00000470026 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
BRCA1-209ENST00000470026 SMARCA1P28370 1054 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 PPP1R2P41236 205 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 HERVK_113P62684 666 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 GSTO1P78417 241 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 C7orf25Q9BPX7 421 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 SRP68Q9UHB9 627 aaKnown RBP15.32■□□□□ 0.04
BRCA1-209ENST00000470026 LEMD3Q9Y2U8 911 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 SNED1Q8TER0 1413 aa15.32■□□□□ 0.04
BRCA1-209ENST00000470026 RASSF10A6NK89 507 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 H3BQF6 201 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 ERLIN1O75477 346 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 CCNE1P24864 410 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 NOVP48745 357 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 ORC2Q13416 577 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-209ENST00000470026 HDXQ7Z353 690 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 KRT25Q7Z3Z0 450 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 TRIM47Q96LD4 638 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 NUP58Q9BVL2 599 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 TRIM9Q9C026 710 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 MKNK2Q9HBH9 465 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 ZCCHC17Q9NP64 241 aaKnown RBP15.31■□□□□ 0.04
BRCA1-209ENST00000470026 CALCOCO1Q9P1Z2 691 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 BAG3O95817 575 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 TFRCP02786 760 aaKnown RBP15.31■□□□□ 0.04
BRCA1-209ENST00000470026 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 FIGNQ5HY92 759 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 PAPD7Q5XG87 772 aaKnown RBP15.31■□□□□ 0.04
BRCA1-209ENST00000470026 WDR93Q6P2C0 686 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 SMIM5Q71RC9 77 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 HEATR3Q7Z4Q2 680 aa15.31■□□□□ 0.04
BRCA1-209ENST00000470026 ZSCAN29Q8IWY8 852 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms