RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 BMP3P12645 472 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 GNAT2P19087 354 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 MCCP23508 829 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 SMAD3P84022 425 aaKnown RBP14.61□□□□□ -0.07
HDAC3-204ENST00000469207 CTDSPL2Q05D32 466 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 PPARAQ07869 468 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 TMEM63BQ5T3F8 832 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 C16orf59Q7L2K0 433 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 ARMCX2Q7L311 632 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 ANKRD33Q7Z3H0 272 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 MSL3Q8N5Y2 521 aaKnown RBP14.61□□□□□ -0.07
HDAC3-204ENST00000469207 GPATCH3Q96I76 525 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 ZNF536O15090 1300 aa14.61□□□□□ -0.07
HDAC3-204ENST00000469207 PRUNE2Q8WUY3 3088 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 VCANP13611 3396 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 SOWAHBA6NEL2 793 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 DCDC2CA8MYV0 355 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 CTAGE5O15320 804 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 FOXP2O15409 715 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 CDK7P50613 346 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 BEX3Q00994 111 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 FPGSQ05932 587 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 GNASQ5JWF2 1037 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 ZMYM1Q5SVZ6 1142 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 KCTD1Q719H9 257 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 GMCL1P1Q8NEA9 526 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 NUP133Q8WUM0 1156 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 TOX2Q96NM4 488 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 PURBQ96QR8 312 aaKnown RBP14.6□□□□□ -0.07
HDAC3-204ENST00000469207 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.6□□□□□ -0.071e-9■■■□□ 19.1
HDAC3-204ENST00000469207 KATNBL1Q9H079 304 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 ABHD16BQ9H3Z7 469 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 IL17RBQ9NRM6 502 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 MCM3APO60318 1980 aa14.6□□□□□ -0.07
HDAC3-204ENST00000469207 GRXCR1A8MXD5 290 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 TIMP1P01033 207 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 ACRP10323 421 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 PDE4BQ07343 736 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 GRIN2CQ14957 1233 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 CCDC174Q6PII3 467 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
HDAC3-204ENST00000469207 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 MAFAQ8NHW3 353 aaPredicted RBP14.59□□□□□ -0.07
HDAC3-204ENST00000469207 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 NAPBQ9H115 298 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 ZNF287Q9HBT7 754 aa14.59□□□□□ -0.07
HDAC3-204ENST00000469207 MOXD2PA6NHM9 499 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 ALAS1P13196 640 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 SLC1A4P43007 532 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 GJA9P57773 515 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 IKQ13123 557 aaPredicted RBP14.58□□□□□ -0.08
HDAC3-204ENST00000469207 MUM1L1Q5H9M0 696 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 VPS53Q5VIR6 699 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC3-204ENST00000469207 EEPD1Q7L9B9 569 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 FAM133AQ8N9E0 248 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 STAG1Q8WVM7 1258 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 GLT1D1Q96MS3 346 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 TRERF1Q96PN7 1200 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 NACAP1Q9BZK3 213 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 PPP1R12CQ9BZL4 782 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 A1CFQ9NQ94 594 aaKnown RBP14.58□□□□□ -0.08
HDAC3-204ENST00000469207 PDGFCQ9NRA1 345 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 TBX21Q9UL17 535 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 STX8Q9UNK0 236 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 ASTN1O14525 1302 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 TTC41PQ6P2S7 1318 aa14.58□□□□□ -0.08
HDAC3-204ENST00000469207 ARVCFO00192 962 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 FOSL2P15408 326 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 CSF2RAP15509 400 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 CST5P28325 142 aaPredicted RBP14.57□□□□□ -0.08
HDAC3-204ENST00000469207 PBX2P40425 430 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 STAT2P52630 851 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 OAZ1P54368 228 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 MFSD5Q6N075 450 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 NOL8Q76FK4 1167 aaKnown RBP14.57□□□□□ -0.08
HDAC3-204ENST00000469207 UPF3AQ9H1J1 476 aaKnown RBP14.57□□□□□ -0.08
HDAC3-204ENST00000469207 RNF146Q9NTX7 359 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 FBXO40Q9UH90 709 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 ELP1O95163 1332 aa14.57□□□□□ -0.08
HDAC3-204ENST00000469207 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.56□□□□□ -0.08
HDAC3-204ENST00000469207 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.56□□□□□ -0.08
HDAC3-204ENST00000469207 TNFAIP2Q03169 654 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 TMEM240Q5SV17 173 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 TTBK2Q6IQ55 1244 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 RCSD1Q6JBY9 416 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 CXCL17Q6UXB2 119 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 PCSK9Q8NBP7 692 aaKnown RBP14.56□□□□□ -0.08
HDAC3-204ENST00000469207 CHURC1Q8WUH1 139 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 SPC25Q9HBM1 224 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 PRR12Q9ULL5 1215 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC3-204ENST00000469207 CUL9Q8IWT3 2517 aa14.56□□□□□ -0.08
HDAC3-204ENST00000469207 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
HDAC3-204ENST00000469207 TSPY2A6NKD2 308 aa14.55□□□□□ -0.08
HDAC3-204ENST00000469207 ERC2O15083 957 aa14.55□□□□□ -0.08
HDAC3-204ENST00000469207 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms