RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 PAGR1Q9BTK6 254 aa15.21■□□□□ 0.03
SCAP-210ENST00000468965 VAT1LQ9HCJ6 419 aa15.21■□□□□ 0.03
SCAP-210ENST00000468965 SH2B1Q9NRF2 756 aaPredicted RBP15.21■□□□□ 0.03
SCAP-210ENST00000468965 SAGE1Q9NXZ1 904 aa15.21■□□□□ 0.03
SCAP-210ENST00000468965 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
SCAP-210ENST00000468965 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
SCAP-210ENST00000468965 RABGAP1Q9Y3P9 1069 aa15.21■□□□□ 0.03
SCAP-210ENST00000468965 RBBP6Q7Z6E9 1792 aaKnown RBP15.21■□□□□ 0.02
SCAP-210ENST00000468965 CCDC196A0A1B0GTZ2 297 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 hCG_1642624A0A1W2PR95 340 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 DHX16O60231 1041 aaKnown RBP15.2■□□□□ 0.02
SCAP-210ENST00000468965 PPFIA3O75145 1194 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 CTDNEP1O95476 244 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 FDX1P10109 184 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 IFNAR1P17181 557 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 MCM2P49736 904 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 CDC37Q16543 378 aaPredicted RBP15.2■□□□□ 0.02
SCAP-210ENST00000468965 FAM110CQ1W6H9 321 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 QRICH1Q2TAL8 776 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 CCDC174Q6PII3 467 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 CCDC83Q8IWF9 413 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 PIBF1Q8WXW3 757 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 SNX21Q969T3 373 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 TMX3Q96JJ7 454 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 PIGSQ96S52 555 aa15.2■□□□□ 0.02
SCAP-210ENST00000468965 RAVER2Q9HCJ3 691 aaKnown RBP15.2■□□□□ 0.02
SCAP-210ENST00000468965 LCTP09848 1927 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 PPP1R11O60927 126 aaPredicted RBP15.19■□□□□ 0.02
SCAP-210ENST00000468965 ZBED4O75132 1171 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 ERVK-9P63128 1117 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 ERVK-24P63145 666 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 HOMER1Q86YM7 354 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 CPXCR1Q8N123 301 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 PHKBQ93100 1093 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 AGBL1Q96MI9 1066 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 SPATC1LQ9H0A9 340 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 TSKSQ9UJT2 592 aa15.19■□□□□ 0.02
SCAP-210ENST00000468965 ATP2A1O14983 1001 aa15.18■□□□□ 0.02
SCAP-210ENST00000468965 ZBTB5O15062 677 aa15.18■□□□□ 0.02
SCAP-210ENST00000468965 OAZ1P54368 228 aa15.18■□□□□ 0.02
SCAP-210ENST00000468965 PLS1Q14651 629 aa15.18■□□□□ 0.02
SCAP-210ENST00000468965 NSUN7Q8NE18 718 aaKnown RBP15.18■□□□□ 0.02
SCAP-210ENST00000468965 MOV10L1Q9BXT6 1211 aaKnown RBP15.18■□□□□ 0.02
SCAP-210ENST00000468965 RIPK3Q9Y572 518 aa15.18■□□□□ 0.02
SCAP-210ENST00000468965 PLXNA1Q9UIW2 1896 aa15.18■□□□□ 0.02
SCAP-210ENST00000468965 PNMA6FA0A0J9YX94 578 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 CPLX1O14810 134 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 PRPF3O43395 683 aaKnown RBP15.17■□□□□ 0.02
SCAP-210ENST00000468965 ICAM1P05362 532 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 STAT3P40763 770 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 PKN1Q16512 942 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 RIOX2Q8IUF8 465 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 GPRC5AQ8NFJ5 357 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 RRP36Q96EU6 259 aaKnown RBP15.17■□□□□ 0.02
SCAP-210ENST00000468965 BEGAINQ9BUH8 593 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 SLC26A6Q9BXS9 759 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 PORCNQ9H237 461 aa15.17■□□□□ 0.02
SCAP-210ENST00000468965 CTDP1Q9Y5B0 961 aaPredicted RBP15.17■□□□□ 0.02
SCAP-210ENST00000468965 V9GY48 417 aaPredicted RBP15.17■□□□□ 0.02
SCAP-210ENST00000468965 K7ELQ4 463 aaPredicted RBP15.16■□□□□ 0.02
SCAP-210ENST00000468965 GPR25O00155 361 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 JAK2O60674 1132 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 FMNL1O95466 1100 aaPredicted RBP15.16■□□□□ 0.02
SCAP-210ENST00000468965 CAP1Q01518 475 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 SSRP1Q08945 709 aaKnown RBP15.16■□□□□ 0.02
SCAP-210ENST00000468965 SNRNP48Q6IEG0 339 aaKnown RBP15.16■□□□□ 0.02
SCAP-210ENST00000468965 CPLX2Q6PUV4 134 aaKnown RBP15.16■□□□□ 0.02
SCAP-210ENST00000468965 FBXO11Q86XK2 927 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 TEX13BQ9BXU2 312 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 RNF26Q9BY78 433 aaPredicted RBP15.16■□□□□ 0.02
SCAP-210ENST00000468965 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 CCPG1Q9ULG6 757 aa15.16■□□□□ 0.02
SCAP-210ENST00000468965 MCM3APO60318 1980 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 FOXN1O15353 648 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 HSPA1AP0DMV8 641 aaKnown RBP15.15■□□□□ 0.02
SCAP-210ENST00000468965 HSPA1BP0DMV9 641 aaKnown RBP15.15■□□□□ 0.02
SCAP-210ENST00000468965 ALAS1P13196 640 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 ERCC3P19447 782 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 CTGFP29279 349 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 SLC4A3P48751 1232 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 CUL4AQ13619 759 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 USH1GQ495M9 461 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 NOM1Q5C9Z4 860 aaKnown RBP15.15■□□□□ 0.02
SCAP-210ENST00000468965 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 COA7Q96BR5 231 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 AMNQ9BXJ7 453 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 SEC63Q9UGP8 760 aaKnown RBP15.15■□□□□ 0.02
SCAP-210ENST00000468965 ZNF236Q9UL36 1845 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 STK36Q9NRP7 1315 aa15.15■□□□□ 0.02
SCAP-210ENST00000468965 CDKL5O76039 1030 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 FDPSP14324 419 aaKnown RBP15.14■□□□□ 0.01
SCAP-210ENST00000468965 CCNA1P78396 465 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 SP3Q02447 781 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 PFKFB3Q16875 520 aaPredicted RBP15.14■□□□□ 0.01
SCAP-210ENST00000468965 MUM1L1Q5H9M0 696 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 TYW1BQ6NUM6 668 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 HSCBQ8IWL3 235 aa15.14■□□□□ 0.01
SCAP-210ENST00000468965 SHCBP1Q8NEM2 672 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms