RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 SGSM2O43147 1006 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 KDM4AO75164 1064 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 CCDC96Q2M329 555 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 NECAB2Q7Z6G3 386 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 PAWRQ96IZ0 340 aaKnown RBP16.98■□□□□ 0.31
COL27A1-203ENST00000468565 NRBP1Q9UHY1 535 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 PRR12Q9ULL5 1215 aa16.98■□□□□ 0.31
COL27A1-203ENST00000468565 ZNF536O15090 1300 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 B4E1Z4 1266 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 PGK2P07205 417 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 SNHG28P0DPA3 235 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 PDHBP11177 359 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 MNX1P50219 401 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-203ENST00000468565 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 TRPV1Q8NER1 839 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 ANKS1AQ92625 1134 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 DDX20Q9UHI6 824 aaKnown RBP16.97■□□□□ 0.31
COL27A1-203ENST00000468565 MTMR7Q9Y216 660 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 MYH6P13533 1939 aa16.97■□□□□ 0.31
COL27A1-203ENST00000468565 DNAJC25-GNG10A0A024R161 153 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 SLC4A3P48751 1232 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 DIS3LQ8TF46 1054 aaKnown RBP16.96■□□□□ 0.31
COL27A1-203ENST00000468565 CHMP4CQ96CF2 233 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 TBC1D32Q96NH3 1257 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 ZKSCAN3Q9BRR0 538 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 CEP290O15078 2479 aa16.96■□□□□ 0.31
COL27A1-203ENST00000468565 CNGA1P29973 690 aa16.96■□□□□ 0.3
COL27A1-203ENST00000468565 PTH1RQ03431 593 aa16.96■□□□□ 0.3
COL27A1-203ENST00000468565 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.3
COL27A1-203ENST00000468565 DPF3Q92784 378 aa16.96■□□□□ 0.3
COL27A1-203ENST00000468565 ZSCAN10Q96SZ4 725 aaPredicted RBP16.96■□□□□ 0.3
COL27A1-203ENST00000468565 TINF2Q9BSI4 451 aa16.96■□□□□ 0.3
COL27A1-203ENST00000468565 ZSWIM5Q9P217 1185 aa16.96■□□□□ 0.3
COL27A1-203ENST00000468565 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
COL27A1-203ENST00000468565 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
COL27A1-203ENST00000468565 ACAD9Q9H845 621 aa16.95■□□□□ 0.3
COL27A1-203ENST00000468565 LCTP09848 1927 aa16.95■□□□□ 0.3
COL27A1-203ENST00000468565 SEPT4O43236 478 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 BMP2KLQ5H9B9 411 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 TTBK2Q6IQ55 1244 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 ZNF467Q7Z7K2 595 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-203ENST00000468565 ANKRD35Q8N283 1001 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 C11orf49Q9H6J7 331 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 FRMPD2Q68DX3 1309 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-203ENST00000468565 CYP21A2P08686 494 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 ENAHQ8N8S7 591 aaPredicted RBP16.94■□□□□ 0.3
COL27A1-203ENST00000468565 KAT14Q9H8E8 782 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 RNF146Q9NTX7 359 aa16.94■□□□□ 0.3
COL27A1-203ENST00000468565 TNKSO95271 1327 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 SYNGAP1Q96PV0 1343 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 ICAM1P05362 532 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 TRDNQ13061 729 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
COL27A1-203ENST00000468565 PNMA1Q8ND90 353 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 MAP4K1Q92918 833 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 TRERF1Q96PN7 1200 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 GPCPD1Q9NPB8 672 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 HOMER2Q9NSB8 354 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
COL27A1-203ENST00000468565 COL6A1P12109 1028 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 SLC16A2P36021 539 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 PRAMEF19Q5SWL8 479 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 CCPG1Q9ULG6 757 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 NR2E3Q9Y5X4 410 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 PFASO15067 1338 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 ALAS1P13196 640 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 SNAP25P60880 206 aa16.92■□□□□ 0.3
COL27A1-203ENST00000468565 A1CFQ9NQ94 594 aaKnown RBP16.92■□□□□ 0.3
COL27A1-203ENST00000468565 H0YGN5 161 aa16.91■□□□□ 0.3
COL27A1-203ENST00000468565 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
COL27A1-203ENST00000468565 FGD4Q96M96 766 aa16.91■□□□□ 0.3
COL27A1-203ENST00000468565 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
COL27A1-203ENST00000468565 LRRC37A2A6NM11 1700 aa16.91■□□□□ 0.3
COL27A1-203ENST00000468565 DNM1LO00429 736 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 EVI5O60447 810 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 ZNF865P0CJ78 1059 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-203ENST00000468565 SEC23AQ15436 765 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
COL27A1-203ENST00000468565 CYB5R4Q7L1T6 521 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 FAM133AQ8N9E0 248 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 ARRDC4Q8NCT1 418 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 ESYT1Q9BSJ8 1104 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 RBM8AQ9Y5S9 174 aaKnown RBP16.9■□□□□ 0.3
COL27A1-203ENST00000468565 WDR19Q8NEZ3 1342 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 E7EWF7 191 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
COL27A1-203ENST00000468565 C1QBPQ07021 282 aaKnown RBP16.9■□□□□ 0.3
COL27A1-203ENST00000468565 ASPRV1Q53RT3 343 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 NCOA7Q8NI08 942 aa16.9■□□□□ 0.3
COL27A1-203ENST00000468565 POTEB2H3BUK9 544 aa16.89■□□□□ 0.29
COL27A1-203ENST00000468565 AKR1A1P14550 325 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms