RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 PRR12Q9ULL5 1215 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 RIPK3Q9Y572 518 aa17.16■□□□□ 0.34
COMMD3-206ENST00000468179 SGSM2O43147 1006 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 SEPT4O43236 478 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 EVI5O60447 810 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 GPATCH4Q5T3I0 446 aaKnown RBP17.15■□□□□ 0.34
COMMD3-206ENST00000468179 ARRDC4Q8NCT1 418 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 CHMP4CQ96CF2 233 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 TINF2Q9BSI4 451 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 CNPY2Q9Y2B0 182 aa17.15■□□□□ 0.34
COMMD3-206ENST00000468179 PARP14Q460N5 1801 aa17.14■□□□□ 0.33
COMMD3-206ENST00000468179 B4E1Z4 1266 aa17.14■□□□□ 0.33
COMMD3-206ENST00000468179 NEFLP07196 543 aa17.14■□□□□ 0.33
COMMD3-206ENST00000468179 PDHBP11177 359 aa17.14■□□□□ 0.33
COMMD3-206ENST00000468179 SYDE2Q5VT97 1194 aa17.14■□□□□ 0.33
COMMD3-206ENST00000468179 ZNF467Q7Z7K2 595 aaPredicted RBP17.14■□□□□ 0.33
COMMD3-206ENST00000468179 ZSWIM5Q9P217 1185 aa17.14■□□□□ 0.33
COMMD3-206ENST00000468179 PFASO15067 1338 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 DNAJC25-GNG10A0A024R161 153 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 ICAM1P05362 532 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 ZKSCAN3Q9BRR0 538 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 IL25Q9H293 177 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 HOMER2Q9NSB8 354 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 RNF146Q9NTX7 359 aa17.13■□□□□ 0.33
COMMD3-206ENST00000468179 PDE4DIPQ5VU43 2346 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 FRMPD2Q68DX3 1309 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-206ENST00000468179 SNHG28P0DPA3 235 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 ALAS1P13196 640 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
COMMD3-206ENST00000468179 PNMA1Q8ND90 353 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 TRPV1Q8NER1 839 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 DIS3LQ8TF46 1054 aaKnown RBP17.12■□□□□ 0.33
COMMD3-206ENST00000468179 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 RANBP17Q9H2T7 1088 aaKnown RBP17.12■□□□□ 0.33
COMMD3-206ENST00000468179 CCPG1Q9ULG6 757 aa17.12■□□□□ 0.33
COMMD3-206ENST00000468179 ZNF536O15090 1300 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 TNKSO95271 1327 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 ERICH2A1L162 156 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 DNM1LO00429 736 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 SLC16A2P36021 539 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 PTH1RQ03431 593 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 BMP2KLQ5H9B9 411 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 IFIT1BQ5T764 474 aaKnown RBP17.11■□□□□ 0.33
COMMD3-206ENST00000468179 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 MAP4K1Q92918 833 aa17.11■□□□□ 0.33
COMMD3-206ENST00000468179 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
COMMD3-206ENST00000468179 CENPFP49454 3210 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 KBTBD13C9JR72 458 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 H0YGN5 161 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 RARBP10826 455 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 MNX1P50219 401 aaPredicted RBP17.1■□□□□ 0.33
COMMD3-206ENST00000468179 SART3Q15020 963 aaKnown RBP17.1■□□□□ 0.33
COMMD3-206ENST00000468179 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
COMMD3-206ENST00000468179 NCOA7Q8NI08 942 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 FAM184BQ9ULE4 1060 aa17.1■□□□□ 0.33
COMMD3-206ENST00000468179 ASB14A6NK59 587 aa17.09■□□□□ 0.33
COMMD3-206ENST00000468179 CYP21A2P08686 494 aa17.09■□□□□ 0.33
COMMD3-206ENST00000468179 COL6A1P12109 1028 aa17.09■□□□□ 0.33
COMMD3-206ENST00000468179 AKR1A1P14550 325 aa17.09■□□□□ 0.33
COMMD3-206ENST00000468179 SNAP25P60880 206 aa17.09■□□□□ 0.33
COMMD3-206ENST00000468179 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
COMMD3-206ENST00000468179 WDR19Q8NEZ3 1342 aa17.08■□□□□ 0.33
COMMD3-206ENST00000468179 PARP1P09874 1014 aaKnown RBP17.08■□□□□ 0.32
COMMD3-206ENST00000468179 RASGRP2Q7LDG7 609 aa17.08■□□□□ 0.32
COMMD3-206ENST00000468179 RNF180Q86T96 592 aa17.08■□□□□ 0.32
COMMD3-206ENST00000468179 ESYT1Q9BSJ8 1104 aa17.08■□□□□ 0.32
COMMD3-206ENST00000468179 ABHD16BQ9H3Z7 469 aa17.08■□□□□ 0.32
COMMD3-206ENST00000468179 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 E7EWF7 191 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 ZNF865P0CJ78 1059 aaPredicted RBP17.07■□□□□ 0.32
COMMD3-206ENST00000468179 NSMFQ6X4W1 530 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 FAM133AQ8N9E0 248 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 SENP6Q9GZR1 1112 aaPredicted RBP17.07■□□□□ 0.32
COMMD3-206ENST00000468179 MAF1Q9H063 256 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 XPNPEP3Q9NQH7 507 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.07■□□□□ 0.32
COMMD3-206ENST00000468179 CYP39A1Q9NYL5 469 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 ADD3Q9UEY8 706 aaKnown RBP17.07■□□□□ 0.32
COMMD3-206ENST00000468179 RBM8AQ9Y5S9 174 aaKnown RBP17.07■□□□□ 0.32
COMMD3-206ENST00000468179 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
COMMD3-206ENST00000468179 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
COMMD3-206ENST00000468179 IFIT3O14879 490 aaKnown RBP17.06■□□□□ 0.32
COMMD3-206ENST00000468179 SNAI1O95863 264 aaPredicted RBP17.06■□□□□ 0.32
COMMD3-206ENST00000468179 ACVR2BQ13705 512 aa17.06■□□□□ 0.32
COMMD3-206ENST00000468179 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
COMMD3-206ENST00000468179 GJC2Q5T442 439 aaPredicted RBP17.06■□□□□ 0.32
COMMD3-206ENST00000468179 ARMCX2Q7L311 632 aa17.06■□□□□ 0.32
COMMD3-206ENST00000468179 MPHOSPH6Q99547 160 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms