RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 PUS7LQ9H0K6 701 aaKnown RBP16.3■□□□□ 0.2
RPP40-204ENST00000468105 RFXAPO00287 272 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 RAD21O60216 631 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 NDUFB10O96000 172 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 IGFBP4P22692 258 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
RPP40-204ENST00000468105 SLC43A3Q8NBI5 491 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPP40-204ENST00000468105 HERVK_113Q902F9 699 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 GLT1D1Q96MS3 346 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 BCL11AQ9H165 835 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 WNT8AQ9H1J5 351 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 BOLA2Q9H3K6 86 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
RPP40-204ENST00000468105 ATP8A2Q9NTI2 1148 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
RPP40-204ENST00000468105 PRRC2BQ5JSZ5 2229 aaKnown RBP16.29■□□□□ 0.2
RPP40-204ENST00000468105 F5H6K3 240 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 ARHGEF15O94989 841 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 RASA1P20936 1047 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 PLA2G5P39877 138 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 KCNQ1P51787 676 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 MRPS5P82675 430 aaKnown RBP16.28■□□□□ 0.2
RPP40-204ENST00000468105 KLRC3Q07444 240 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 SLF1Q9BQI6 1058 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 SH2D4AQ9H788 454 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 IL23AQ9NPF7 189 aa16.28■□□□□ 0.2
RPP40-204ENST00000468105 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
RPP40-204ENST00000468105 EPOPA6NHQ4 379 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 CCL23P55773 120 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 NKX3-2P78367 333 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 GNASQ5JWF2 1037 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 KRT40Q6A162 431 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 CXCL17Q6UXB2 119 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 ARMCX2Q7L311 632 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
RPP40-204ENST00000468105 KHSRPQ92945 711 aaKnown RBP eCLIP16.27■□□□□ 0.2
RPP40-204ENST00000468105 DDX11Q96FC9 970 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.2
RPP40-204ENST00000468105 LRRC37A2A6NM11 1700 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.26■□□□□ 0.19
RPP40-204ENST00000468105 ZNF467Q7Z7K2 595 aaPredicted RBP16.26■□□□□ 0.19
RPP40-204ENST00000468105 ERC1Q8IUD2 1116 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 TMEM199Q8N511 208 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 VTI1AQ96AJ9 217 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 GOPCQ9HD26 462 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 PDGFCQ9NRA1 345 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 GNEQ9Y223 722 aaKnown RBP16.26■□□□□ 0.19
RPP40-204ENST00000468105 SLC4A4Q9Y6R1 1079 aa16.26■□□□□ 0.19
RPP40-204ENST00000468105 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 PSMC6P62333 389 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
RPP40-204ENST00000468105 SPRED2Q7Z698 418 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
RPP40-204ENST00000468105 SCLYQ96I15 445 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
RPP40-204ENST00000468105 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
RPP40-204ENST00000468105 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 EPHX3Q9H6B9 360 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 SLC38A10Q9HBR0 1119 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 LCTP09848 1927 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 MYH7P12883 1935 aa16.25■□□□□ 0.19
RPP40-204ENST00000468105 SCN5AQ14524 2016 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 ZNF536O15090 1300 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 B4GALT4O60513 344 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 FGBP02675 491 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 FAM133AQ8N9E0 248 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 PCSK9Q8NBP7 692 aaKnown RBP16.24■□□□□ 0.19
RPP40-204ENST00000468105 PPP1R13LQ8WUF5 828 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 KIFC2Q96AC6 838 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
RPP40-204ENST00000468105 MYH4Q9Y623 1939 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 MROH7Q68CQ1 1323 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 GSG1L2A8MUP6 293 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 SMPD1P17405 629 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 ATP5JP18859 108 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 COPB2P35606 906 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 UBE3CQ15386 1083 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 RASGRP2Q7LDG7 609 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 PRPF38AQ8NAV1 312 aaKnown RBP16.23■□□□□ 0.19
RPP40-204ENST00000468105 CHMP4CQ96CF2 233 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
RPP40-204ENST00000468105 HAUS7Q99871 368 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 HIPK3Q9H422 1215 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 CERS4Q9HA82 394 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 SLC28A3Q9HAS3 691 aa16.23■□□□□ 0.19
RPP40-204ENST00000468105 EPB41L4AQ9HCS5 686 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms