RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 COL6A1P12109 1028 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 CNGA1P29973 690 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 STAT2P52630 851 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 FAM47AQ5JRC9 791 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 VPS53Q5VIR6 699 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 SLFN13Q68D06 897 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 SNRNP48Q6IEG0 339 aaKnown RBP12.26□□□□□ -0.45
SSR3-205ENST00000467789 FAM160B2Q86V87 743 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 ARRDC4Q8NCT1 418 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 NUP88Q99567 741 aaPredicted RBP12.26□□□□□ -0.45
SSR3-205ENST00000467789 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 STX8Q9UNK0 236 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
SSR3-205ENST00000467789 DNM1LO00429 736 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 SDSP20132 328 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 SLC1A4P43007 532 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 NOVP48745 357 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
SSR3-205ENST00000467789 LRRC47Q8N1G4 583 aaKnown RBP12.25□□□□□ -0.45
SSR3-205ENST00000467789 CHST13Q8NET6 341 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 KIFC2Q96AC6 838 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 TCP11L1Q9NUJ3 509 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 SUPT16HQ9Y5B9 1047 aaKnown RBP12.25□□□□□ -0.45
SSR3-205ENST00000467789 PFASO15067 1338 aa12.25□□□□□ -0.45
SSR3-205ENST00000467789 TMEM232C9JQI7 657 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 RANBP6O60518 1105 aaKnown RBP12.24□□□□□ -0.45
SSR3-205ENST00000467789 ZNF792Q3KQV3 632 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 TRPV1Q8NER1 839 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 STAG1Q8WVM7 1258 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 DDX11Q96FC9 970 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 TINF2Q9BSI4 451 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 PRO3102Q9H379 93 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 RNF41Q9H4P4 317 aaPredicted RBP12.24□□□□□ -0.45
SSR3-205ENST00000467789 IL17RBQ9NRM6 502 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
SSR3-205ENST00000467789 TRIOBPQ9H2D6 2365 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 TKFCQ3LXA3 575 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 MFSD6Q6ZSS7 791 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
SSR3-205ENST00000467789 CPXCR1Q8N123 301 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 DCAF4Q8WV16 495 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 TTC14Q96N46 770 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 TOMM22Q9NS69 142 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
SSR3-205ENST00000467789 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
SSR3-205ENST00000467789 DNAJC25-GNG10A0A024R161 153 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 KBTBD13C9JR72 458 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 PGK2P07205 417 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
SSR3-205ENST00000467789 MCCP23508 829 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 BMP8BP34820 402 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 FXR1P51114 621 aaKnown RBP eCLIP12.22□□□□□ -0.45
SSR3-205ENST00000467789 IKQ13123 557 aaPredicted RBP12.22□□□□□ -0.45
SSR3-205ENST00000467789 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 AKNAD1Q5T1N1 836 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 MAMDC4Q6UXC1 1216 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 C7orf61Q8IZ16 206 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 RAVER2Q9HCJ3 691 aaKnown RBP12.22□□□□□ -0.45
SSR3-205ENST00000467789 RBM27Q9P2N5 1060 aaKnown RBP12.22□□□□□ -0.45
SSR3-205ENST00000467789 PNMA2Q9UL42 364 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 RIPK3Q9Y572 518 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 DNAH12Q6ZR08 3092 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
SSR3-205ENST00000467789 ZNF213O14771 459 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 RARBP10826 455 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 AKR1A1P14550 325 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 CWC27Q6UX04 472 aaKnown RBP12.21□□□□□ -0.45
SSR3-205ENST00000467789 ESR2Q92731 530 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 SENP6Q9GZR1 1112 aaPredicted RBP12.21□□□□□ -0.45
SSR3-205ENST00000467789 ACAD9Q9H845 621 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
SSR3-205ENST00000467789 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
SSR3-205ENST00000467789 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
SSR3-205ENST00000467789 SMCHD1A6NHR9 2005 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 NMT2O60551 498 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 LRRC26Q2I0M4 334 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
SSR3-205ENST00000467789 C1orf53Q5VUE5 145 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 BTNL9Q6UXG8 535 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 RNF180Q86T96 592 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 GDF15Q99988 308 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 ABHD16BQ9H3Z7 469 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 INCENPQ9NQS7 918 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 TACC3Q9Y6A5 838 aa12.2□□□□□ -0.46
SSR3-205ENST00000467789 ZNF536O15090 1300 aa12.19□□□□□ -0.46
SSR3-205ENST00000467789 RAD50Q92878 1312 aa12.19□□□□□ -0.46
SSR3-205ENST00000467789 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
SSR3-205ENST00000467789 SLC4A3P48751 1232 aa12.19□□□□□ -0.46
SSR3-205ENST00000467789 HAND2P61296 217 aa12.19□□□□□ -0.46
SSR3-205ENST00000467789 LRRC41Q15345 812 aa12.19□□□□□ -0.46
SSR3-205ENST00000467789 IMMTQ16891 758 aaKnown RBP12.19□□□□□ -0.46
SSR3-205ENST00000467789 PRAMEF19Q5SWL8 479 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms