RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 PERM1Q5SV97 790 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 ZKSCAN2Q63HK3 967 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 ELMSAN1Q6PJG2 1045 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 NPAS4Q8IUM7 802 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 DTWD1Q8N5C7 304 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 KLHDC4Q8TBB5 520 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 ARHGAP45Q92619 1136 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 RBM17Q96I25 401 aaKnown RBP6.18□□□□□ -1.42
TRIM27-204ENST00000467742 CRAMP1Q96RY5 1269 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 RBSNQ9H1K0 784 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 LTBP3Q9NS15 1303 aa6.18□□□□□ -1.42
TRIM27-204ENST00000467742 COL1A1P02452 1464 aaPredicted RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 C9orf172C9J069 976 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 EIF1AYO14602 144 aaKnown RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 KIF4AO95239 1232 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 EDN3P14138 238 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 EIF2AK2P19525 551 aaKnown RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 KLRK1P26718 216 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 CCT4P50991 539 aaKnown RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ENOX2Q16206 610 aaKnown RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 CCDC152Q4G0S7 254 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 CCDC93Q567U6 631 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 EAPPQ56P03 285 aaPredicted RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ALG1LQ6GMV1 187 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 LMBR1LQ6UX01 489 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ARHGAP27Q6ZUM4 889 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 DDX46Q7L014 1031 aaKnown RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 FMR1NBQ8N0W7 255 aaPredicted RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 C1orf127Q8N9H9 656 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 FBF1Q8TES7 1133 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 SPACA7Q96KW9 195 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 CHRDQ9H2X0 955 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ZNF277Q9NRM2 450 aaPredicted RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 C9orf78Q9NZ63 289 aaPredicted RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 CNTN3Q9P232 1028 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 FOXD3Q9UJU5 478 aaPredicted RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ATP6V0A2Q9Y487 856 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
TRIM27-204ENST00000467742 FOCADQ5VW36 1801 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ZNF541Q9H0D2 1346 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 IRS2Q9Y4H2 1338 aa6.17□□□□□ -1.42
TRIM27-204ENST00000467742 ZNF609O15014 1411 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 PAPPA2Q9BXP8 1791 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 SNAP23O00161 211 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 GRIN3BO60391 1043 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 GHRHP01286 108 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 MAPK8P45983 427 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 RFX5P48382 616 aaPredicted RBP6.16□□□□□ -1.42
TRIM27-204ENST00000467742 RRP1P56182 461 aaKnown RBP6.16□□□□□ -1.42
TRIM27-204ENST00000467742 GPSM2P81274 684 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 MLLT1Q03111 559 aaPredicted RBP6.16□□□□□ -1.42
TRIM27-204ENST00000467742 C9orf131Q5VYM1 1079 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 DZIP1LQ8IYY4 767 aaKnown RBP6.16□□□□□ -1.42
TRIM27-204ENST00000467742 PUS3Q9BZE2 481 aaKnown RBP6.16□□□□□ -1.42
TRIM27-204ENST00000467742 BCL11AQ9H165 835 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 TAOK3Q9H2K8 898 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 RNF181Q9P0P0 153 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 SALL4Q9UJQ4 1053 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.16□□□□□ -1.42
TRIM27-204ENST00000467742 AK9Q5TCS8 1911 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 OTOFQ9HC10 1997 aa6.16□□□□□ -1.42
TRIM27-204ENST00000467742 TRPM7Q96QT4 1865 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 POLR2AP24928 1970 aaKnown RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 PNMA6EA0A0J9YXQ4 647 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 EREGO14944 169 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 P4HBP07237 508 aaKnown RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 UBTFL1P0CB47 393 aaPredicted RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 NRG1Q02297 640 aaPredicted RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 ORC1Q13415 861 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 ADGRE1Q14246 886 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 GRIK4Q16099 956 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 AOC3Q16853 763 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 LRRC24Q50LG9 513 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 NCAPG2Q86XI2 1143 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 WFDC8Q8IUA0 241 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 ITPRIPQ8IWB1 547 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 GALNT12Q8IXK2 581 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 SP8Q8IXZ3 490 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 FTSJ3Q8IY81 847 aaKnown RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 LENG1Q96BZ8 264 aaPredicted RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 PSMD1Q99460 953 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 SMG9Q9H0W8 520 aaKnown RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 POLLQ9UGP5 575 aa6.15□□□□□ -1.42
TRIM27-204ENST00000467742 PA2G4Q9UQ80 394 aaKnown RBP6.15□□□□□ -1.42
TRIM27-204ENST00000467742 MYH2Q9UKX2 1941 aa6.15□□□□□ -1.43
TRIM27-204ENST00000467742 PCNTO95613 3336 aa6.14□□□□□ -1.43
TRIM27-204ENST00000467742 DDX60LQ5H9U9 1706 aaKnown RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 PNMA6FA0A0J9YX94 578 aa6.14□□□□□ -1.43
TRIM27-204ENST00000467742 YDJCA8MPS7 323 aa6.14□□□□□ -1.43
TRIM27-204ENST00000467742 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 IPO8O15397 1037 aaKnown RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 PRPF40AO75400 957 aaKnown RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 UFL1O94874 794 aa6.14□□□□□ -1.43
TRIM27-204ENST00000467742 LDHBP07195 334 aaKnown RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 LMNB1P20700 586 aa6.14□□□□□ -1.43
TRIM27-204ENST00000467742 YY1P25490 414 aa6.14□□□□□ -1.43
TRIM27-204ENST00000467742 IARSP41252 1262 aaKnown RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 RPS8P62241 208 aaKnown RBP6.14□□□□□ -1.43
TRIM27-204ENST00000467742 PTPN12Q05209 780 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms