RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 WDR59Q6PJI9 974 aa10.9□□□□□ -0.66
APTX-214ENST00000467331 FNBP4Q8N3X1 1017 aaPredicted RBP10.9□□□□□ -0.66
APTX-214ENST00000467331 GIMAP8Q8ND71 665 aaPredicted RBP10.9□□□□□ -0.66
APTX-214ENST00000467331 ANKS1AQ92625 1134 aa10.9□□□□□ -0.66
APTX-214ENST00000467331 CHP1Q99653 195 aa10.9□□□□□ -0.66
APTX-214ENST00000467331 RRP15Q9Y3B9 282 aaKnown RBP10.9□□□□□ -0.66
APTX-214ENST00000467331 ZC3H4Q9UPT8 1303 aaKnown RBP10.9□□□□□ -0.66
APTX-214ENST00000467331 LRRIQ3A6PVS8 624 aaPredicted RBP10.9□□□□□ -0.67
APTX-214ENST00000467331 M0R2N6 131 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 SNAP23O00161 211 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 PSMA7O14818 248 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 CAMTA2O94983 1202 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 STAT6P42226 847 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 GYS2P54840 703 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 NAALADL2Q58DX5 795 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 TTI2Q6NXR4 508 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 PIK3AP1Q6ZUJ8 805 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 TSGA10Q9BZW7 698 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 KBTBD4Q9NVX7 518 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 HPCAL4Q9UM19 191 aa10.9□□□□□ -0.67
APTX-214ENST00000467331 ZNF831Q5JPB2 1677 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 RGL2O15211 777 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 N4BP1O75113 896 aaKnown RBP10.89□□□□□ -0.67
APTX-214ENST00000467331 HNRNPH3P31942 346 aaKnown RBP10.89□□□□□ -0.67
APTX-214ENST00000467331 ZBED6P86452 979 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 NCAPH2Q6IBW4 605 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 FAM114A1Q8IWE2 563 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 BLIDQ8IZY5 108 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 COG1Q8WTW3 980 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
APTX-214ENST00000467331 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 CCDC87Q9NVE4 849 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 ARPP21Q9UBL0 812 aaPredicted RBP10.89□□□□□ -0.67
APTX-214ENST00000467331 GUCA1BQ9UMX6 200 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 PCDHA4Q9UN74 947 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 GDAQ9Y2T3 454 aa10.89□□□□□ -0.67
APTX-214ENST00000467331 BICDL2A1A5D9 508 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 CLSTN1O94985 981 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 SYF2O95926 243 aaKnown RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 PRLRP16471 622 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 MCM7P33993 719 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 CCDC178Q5BJE1 867 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 CCDC122Q5T0U0 273 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 INTS5Q6P9B9 1019 aaKnown RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 ZSCAN29Q8IWY8 852 aaPredicted RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 STAMQ92783 540 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 JAKMIP2Q96AA8 810 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 AK8Q96MA6 479 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 ERGIC2Q96RQ1 377 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 EFCC1Q9HA90 598 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 SUGCTQ9HAC7 445 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 MAGEC2Q9UBF1 373 aaPredicted RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 COL4A1P02462 1669 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 ATP1A1P05023 1023 aaKnown RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 GNAQP50148 359 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 MMGT1Q8N4V1 131 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 AFAP1L1Q8TED9 768 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 CCDC102AQ96A19 550 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 MMS19Q96T76 1030 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 EXOC1Q9NV70 894 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 ZNHIT6Q9NWK9 470 aaKnown RBP10.88□□□□□ -0.67
APTX-214ENST00000467331 ABCB11O95342 1321 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 CCDC88AQ3V6T2 1871 aa10.88□□□□□ -0.67
APTX-214ENST00000467331 hCG_1642624A0A1W2PR95 340 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 RNF40O75150 1001 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 PPFIA4O75335 1185 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 TFRCP02786 760 aaKnown RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 CCNE1P24864 410 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 FOXR2Q6PJQ5 311 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 DTHD1Q6ZMT9 781 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 DGKHQ86XP1 1220 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 CRNKL1Q9BZJ0 848 aaKnown RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 BSDC1Q9NW68 430 aaPredicted RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 ROBO3Q96MS0 1386 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 USP17L21D6R901 530 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 IPO7O95373 1038 aaKnown RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 MAGEA9P43362 315 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 VAV2P52735 878 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 RCSD1Q6JBY9 416 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 LRRC31Q6UY01 552 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 CCNI2Q6ZMN8 369 aaPredicted RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 ARHGAP27Q6ZUM4 889 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 KIAA1328Q86T90 577 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 AMOTL1Q8IY63 956 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 ZNF384Q8TF68 577 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 CCDC47Q96A33 483 aaKnown RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 FAM204AQ9H8W3 233 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 DCP1AQ9NPI6 582 aaPredicted RBP10.87□□□□□ -0.67
APTX-214ENST00000467331 SLAIN2Q9P270 581 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
APTX-214ENST00000467331 COL5A3P25940 1745 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms