RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PYM1Q9BRP8 204 aaKnown RBP12.93□□□□□ -0.34
HPS1-208ENST00000467246 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 TMEM260Q9NX78 707 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 CCNT1O60563 726 aaKnown RBP12.93□□□□□ -0.34
HPS1-208ENST00000467246 NONOQ15233 471 aaKnown RBP eCLIP12.93□□□□□ -0.34
HPS1-208ENST00000467246 APTXQ7Z2E3 356 aaKnown RBP12.93□□□□□ -0.34
HPS1-208ENST00000467246 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 PODNQ7Z5L7 613 aa12.93□□□□□ -0.34
HPS1-208ENST00000467246 MPHOSPH10O00566 681 aaKnown RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 TTLL1O95922 423 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 CHRNA5P30532 468 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 TCP10Q12799 353 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 TBX2Q13207 712 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 NR1I3Q14994 352 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 SMAP1Q8IYB5 467 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 FAM177A1Q8N128 213 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 RASSF8Q8NHQ8 419 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 LRRC15Q8TF66 581 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 TMX1Q9H3N1 280 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 SWAP70Q9UH65 585 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 CTNND2Q9UQB3 1225 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 TEX33O43247 280 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 UBA7P41226 1012 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 DHX8Q14562 1220 aaKnown RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 TBCKQ8TEA7 893 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 PPP1R13BQ96KQ4 1090 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 H0YIN7 160 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 RPN1P04843 607 aaKnown RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 SHROOM1Q2M3G4 852 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 CDKAL1Q5VV42 579 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 TTBK2Q6IQ55 1244 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 NEK8Q86SG6 692 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 REXO1Q8N1G1 1221 aaKnown RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 CCDC94Q9BW85 323 aaPredicted RBP12.92□□□□□ -0.34
HPS1-208ENST00000467246 MAPK8IP1Q9UQF2 711 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 PAXBP1Q9Y5B6 917 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 QSER1Q2KHR3 1735 aa12.92□□□□□ -0.34
HPS1-208ENST00000467246 LAD1O00515 517 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 NRDCO43847 1150 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 PRPHP41219 470 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 ADKP55263 362 aaKnown RBP12.91□□□□□ -0.34
HPS1-208ENST00000467246 ZDHHC15Q96MV8 337 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 MAP7D2Q96T17 732 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 DNAJC18Q9H819 358 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 GDAQ9Y2T3 454 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 OR52Z1P0C646 297 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 SLC16A2P36021 539 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 KCNJ6P48051 423 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
HPS1-208ENST00000467246 ZNF543Q08ER8 600 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 DACT2Q5SW24 774 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 ADGRF4Q8IZF3 695 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 CCSER1Q9C0I3 900 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
HPS1-208ENST00000467246 ESYT2A0FGR8 921 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
HPS1-208ENST00000467246 DDTLA6NHG4 134 aaPredicted RBP12.9□□□□□ -0.34
HPS1-208ENST00000467246 ECE2O60344 883 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 ZNF658Q5TYW1 1059 aaPredicted RBP12.9□□□□□ -0.34
HPS1-208ENST00000467246 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 KCTD1Q719H9 257 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 TC2NQ8N9U0 490 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 CTIFO43310 598 aaKnown RBP12.9□□□□□ -0.34
HPS1-208ENST00000467246 PPP1R11O60927 126 aaPredicted RBP12.9□□□□□ -0.34
HPS1-208ENST00000467246 TECP42680 631 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 CCDC112Q8NEF3 446 aa12.9□□□□□ -0.34
HPS1-208ENST00000467246 ADD3Q9UEY8 706 aaKnown RBP12.9□□□□□ -0.34
HPS1-208ENST00000467246 EDIL3O43854 480 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 PRCPP42785 496 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 DMTNQ08495 405 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 STYK1Q6J9G0 422 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 POTEDQ86YR6 584 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 FAM198AQ9UFP1 575 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 MYO3BQ8WXR4 1341 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 PLCG1P19174 1290 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 ADCY7P51828 1080 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 PAK1Q13153 545 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 AOC3Q16853 763 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 CCDC96Q2M329 555 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 SH3BP5LQ7L8J4 393 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 CABP7Q86V35 215 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 NELFBQ8WX92 580 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 RWDD2AQ9UIY3 292 aa12.89□□□□□ -0.35
HPS1-208ENST00000467246 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
HPS1-208ENST00000467246 AK8Q96MA6 479 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms