RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 FAM43AQ8N2R8 423 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
NUP188-204ENST00000467044 COA7Q96BR5 231 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 MTMR8Q96EF0 704 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 ZIC5Q96T25 663 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 PTPN18Q99952 460 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 RANBP17Q9H2T7 1088 aaKnown RBP12.41□□□□□ -0.42
NUP188-204ENST00000467044 PARP14Q460N5 1801 aa12.41□□□□□ -0.42
NUP188-204ENST00000467044 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
NUP188-204ENST00000467044 H3BQV1 296 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 VWA5AO00534 786 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 FDX1P10109 184 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 CYP2C8P10632 490 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 XBP1P17861 261 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 HERVK_113P62684 666 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 NOGQ13253 232 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 TRIM29Q14134 588 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 PLS1Q14651 629 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 USH1GQ495M9 461 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 IFFO2Q5TF58 517 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 OTUD7BQ6GQQ9 843 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 C8orf76Q96K31 380 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 AMNQ9BXJ7 453 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
NUP188-204ENST00000467044 GJB4Q9NTQ9 266 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 VPS54Q9P1Q0 977 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 RLFQ13129 1914 aa12.4□□□□□ -0.42
NUP188-204ENST00000467044 MYPNQ86TC9 1320 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
NUP188-204ENST00000467044 COL11A1P12107 1806 aaPredicted RBP12.39□□□□□ -0.43
NUP188-204ENST00000467044 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
NUP188-204ENST00000467044 PDCP20941 246 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 NAPAP54920 295 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 C1QTNF8P60827 252 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 WWC2Q6AWC2 1192 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 IFNL1Q8IU54 200 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 SMCR8Q8TEV9 937 aaPredicted RBP12.39□□□□□ -0.43
NUP188-204ENST00000467044 CCPG1Q9ULG6 757 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
NUP188-204ENST00000467044 VPS37CA5D8V6 355 aaPredicted RBP12.38□□□□□ -0.43
NUP188-204ENST00000467044 STXBP3O00186 592 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 PPP1R11O60927 126 aaPredicted RBP12.38□□□□□ -0.43
NUP188-204ENST00000467044 ALAS1P13196 640 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
NUP188-204ENST00000467044 SYT1P21579 422 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 TM4SF4P48230 202 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 VEGFBP49765 207 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 NLRP5P59047 1200 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 TRAF1Q13077 416 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 TAF1CQ15572 869 aaPredicted RBP12.38□□□□□ -0.43
NUP188-204ENST00000467044 MB21D1Q8N884 522 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 CCDC12Q8WUD4 166 aaPredicted RBP12.38□□□□□ -0.43
NUP188-204ENST00000467044 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
NUP188-204ENST00000467044 BARHL2Q9NY43 387 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 KCNJ14Q9UNX9 436 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 SMCHD1A6NHR9 2005 aa12.38□□□□□ -0.43
NUP188-204ENST00000467044 hCG_1984214I3L0E3 225 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 STX6O43752 255 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 PEX10O60683 326 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 ICAM1P05362 532 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 HSPA6P17066 643 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 TMEM132BQ14DG7 1078 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 FOXD4L5Q5VV16 416 aaPredicted RBP12.37□□□□□ -0.43
NUP188-204ENST00000467044 KRT40Q6A162 431 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 SNRNP48Q6IEG0 339 aaKnown RBP12.37□□□□□ -0.43
NUP188-204ENST00000467044 LBX2Q6XYB7 198 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 ZNF713Q8N859 430 aaPredicted RBP12.37□□□□□ -0.43
NUP188-204ENST00000467044 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 FOXD4L4Q8WXT5 416 aaPredicted RBP12.37□□□□□ -0.43
NUP188-204ENST00000467044 ZCCHC17Q9NP64 241 aaKnown RBP12.37□□□□□ -0.43
NUP188-204ENST00000467044 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 ZNF536O15090 1300 aa12.37□□□□□ -0.43
NUP188-204ENST00000467044 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 STAT3P40763 770 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 GCLCP48506 637 aaPredicted RBP12.36□□□□□ -0.43
NUP188-204ENST00000467044 OAZ1P54368 228 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
NUP188-204ENST00000467044 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
NUP188-204ENST00000467044 MCTP1Q6DN14 999 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 TYW1BQ6NUM6 668 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
NUP188-204ENST00000467044 REPS2Q8NFH8 660 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 GTF3C2Q8WUA4 911 aaPredicted RBP12.36□□□□□ -0.43
NUP188-204ENST00000467044 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 ZFYVE28Q9HCC9 887 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 C6orf50Q9HD87 102 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
NUP188-204ENST00000467044 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
NUP188-204ENST00000467044 MRPL11Q9Y3B7 192 aaKnown RBP12.36□□□□□ -0.43
NUP188-204ENST00000467044 RABGAP1Q9Y3P9 1069 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms