RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SKA2Q8WVK7 121 aaPredicted RBP9.59□□□□□ -0.87
HPS4-209ENST00000466781 MYL10Q9BUA6 226 aa9.59□□□□□ -0.87
HPS4-209ENST00000466781 CEP170BQ9Y4F5 1589 aaPredicted RBP9.59□□□□□ -0.88
HPS4-209ENST00000466781 PIK3C2BO00750 1634 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 OSBPP22059 807 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 TMOD1P28289 359 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 PALM2Q8IXS6 379 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 DIS3L2Q8IYB7 885 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 CCDC170Q8IYT3 715 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 P3H4Q92791 437 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 INTS4Q96HW7 963 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 LEMD3Q9Y2U8 911 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 PPRC1Q5VV67 1664 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 ZNF804BA4D1E1 1349 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 B4GALNT4Q76KP1 1039 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 KLHL7Q8IXQ5 586 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 LMNTD2Q8IXW0 634 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 ANKRD35Q8N283 1001 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 SCYL1Q96KG9 808 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 KRT12Q99456 494 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 CCDC68Q9H2F9 335 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 ATP8A2Q9NTI2 1148 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 PHBP35232 272 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 PRPSAP1Q14558 356 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 C8orf34Q49A92 452 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 FAM47AQ5JRC9 791 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 REXO1Q8N1G1 1221 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.58□□□□□ -0.88
HPS4-209ENST00000466781 RILPQ96NA2 401 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 CSRNP1Q96S65 589 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 LSM14BQ9BX40 385 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 MIS12Q9H081 205 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 BCAP29Q9UHQ4 241 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 INO80Q9ULG1 1556 aaPredicted RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 MTMR3Q13615 1198 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 PEX26Q7Z412 305 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 HAUS8Q9BT25 410 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 ZNF532Q9HCE3 1301 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 HEG1Q9ULI3 1381 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 K7ENM7 598 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 TLR3O15455 904 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 CYP2J2P51589 502 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 TFAP4Q01664 338 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 TSTA3Q13630 321 aaPredicted RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 KIAA0825Q8IV33 1275 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 TTLL6Q8N841 843 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 IRAK4Q9NWZ3 460 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 HESX1Q9UBX0 185 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 SRP68Q9UHB9 627 aaKnown RBP9.58□□□□□ -0.88
HPS4-209ENST00000466781 PNMA2Q9UL42 364 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 PCDHB13Q9Y5F0 798 aa9.58□□□□□ -0.88
HPS4-209ENST00000466781 AGLP35573 1532 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 TEKT3Q9BXF9 490 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 NUCKS1Q9H1E3 243 aaKnown RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 ABT1Q9ULW3 272 aaKnown RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 FRMPD2Q68DX3 1309 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 CDK12Q9NYV4 1490 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 TRPM1Q7Z4N2 1603 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 N4BP1O75113 896 aaKnown RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 BBOX1O75936 387 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 PCK1P35558 622 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 EVCP57679 992 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 NLRP12P59046 1061 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 RPS6KA1Q15418 735 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 LONRF2Q1L5Z9 754 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 XKR9Q5GH70 373 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 NXNQ6DKJ4 435 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 RUFY4Q6ZNE9 571 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 SLFN12Q8IYM2 578 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 GBP7Q8N8V2 638 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 PARD3BQ8TEW8 1205 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 GRK7Q8WTQ7 553 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 SMCO2A6NFE2 343 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 SEC24BO95487 1268 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 GYG1P46976 350 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 IGBP1P78318 339 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 RBBP5Q15291 538 aaKnown RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 GPBP1Q86WP2 473 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 MLKLQ8NB16 471 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 PPME1Q9Y570 386 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 ZBTB7AO95365 584 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 TFDP1Q14186 410 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 VPS72Q15906 364 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 DENND2CQ68D51 928 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 ZNF449Q6P9G9 518 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 CHMP6Q96FZ7 201 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 ANAPC5Q9UJX4 755 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 ZHX1Q9UKY1 873 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 LMTK2Q8IWU2 1503 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 PDE6CP51160 858 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 POLGP54098 1239 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 DMP1Q13316 513 aaPredicted RBP9.57□□□□□ -0.88
HPS4-209ENST00000466781 POSTNQ15063 836 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 PHLDB2Q86SQ0 1253 aa9.57□□□□□ -0.88
HPS4-209ENST00000466781 PSPC1Q8WXF1 523 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms