RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 CAVIN2O95810 425 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 LMNB1P20700 586 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 CAP2P40123 477 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 INF2Q27J81 1249 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 KIF4BQ2VIQ3 1234 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 TBC1D10BQ4KMP7 808 aaPredicted RBP24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 KIAA1468Q9P260 1216 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 ADCY7P51828 1080 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 STX1AQ16623 288 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 TEPSINQ96N21 525 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 TMX2Q9Y320 296 aa24.09■■□□□ 1.45
PPP1R3F-203ENST00000466508 NONOQ15233 471 aaKnown RBP eCLIP24.08■■□□□ 1.45
PPP1R3F-203ENST00000466508 ARL6IP4Q66PJ3 421 aaKnown RBP24.08■■□□□ 1.45
PPP1R3F-203ENST00000466508 NUP88Q99567 741 aaPredicted RBP24.08■■□□□ 1.45
PPP1R3F-203ENST00000466508 BMP3P12645 472 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 ECE1P42892 770 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 HACL1Q9UJ83 578 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 QRICH1Q2TAL8 776 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 LONRF3Q496Y0 759 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 KRBA2Q6ZNG9 492 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 ELOA2Q8IYF1 753 aaPredicted RBP24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 C4orf32Q8N8J7 132 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 ERCC4Q92889 916 aaPredicted RBP24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 DNAJC25Q9H1X3 360 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 GOPCQ9HD26 462 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 RIC8AQ9NPQ8 531 aa24.07■■□□□ 1.44
PPP1R3F-203ENST00000466508 ASTN2O75129 1339 aaPredicted RBP24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 H7C1D1 291 aa24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 ASNSP08243 561 aa24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 CDC37Q16543 378 aaPredicted RBP24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 CNNM3Q8NE01 707 aa24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 ACER1Q8TDN7 264 aa24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 PDLIM2Q96JY6 352 aa24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 ANO10Q9NW15 660 aa24.06■■□□□ 1.44
PPP1R3F-203ENST00000466508 VWA3AA6NCI4 1184 aa24.05■■□□□ 1.44
PPP1R3F-203ENST00000466508 POLR2DO15514 142 aaKnown RBP24.05■■□□□ 1.44
PPP1R3F-203ENST00000466508 BTNL9Q6UXG8 535 aa24.05■■□□□ 1.44
PPP1R3F-203ENST00000466508 USP49Q70CQ1 688 aa24.05■■□□□ 1.44
PPP1R3F-203ENST00000466508 GPC2Q8N158 579 aa24.05■■□□□ 1.44
PPP1R3F-203ENST00000466508 BIN2Q9UBW5 565 aaPredicted RBP24.05■■□□□ 1.44
PPP1R3F-203ENST00000466508 PHF20L1A8MW92 1017 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 ZNF165P49910 485 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 NEK8Q86SG6 692 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 CUL5Q93034 780 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 SH2D4AQ9H788 454 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 CBX8Q9HC52 389 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 TMEM232C9JQI7 657 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 LAD1O00515 517 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 IKQ13123 557 aaPredicted RBP24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 SYDE2Q5VT97 1194 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 JAKMIP3Q5VZ66 844 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 SPICE1Q8N0Z3 855 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 SYMPKQ92797 1274 aaKnown RBP24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 EPSTI1Q96J88 318 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 DEFB129Q9H1M3 183 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 GPRC5DQ9NZD1 345 aa24.04■■□□□ 1.44
PPP1R3F-203ENST00000466508 C9orf131Q5VYM1 1079 aa24.03■■□□□ 1.44
PPP1R3F-203ENST00000466508 TBCKQ8TEA7 893 aa24.03■■□□□ 1.44
PPP1R3F-203ENST00000466508 TMEM260Q9NX78 707 aa24.03■■□□□ 1.44
PPP1R3F-203ENST00000466508 HOOK1Q9UJC3 728 aaKnown RBP24.03■■□□□ 1.44
PPP1R3F-203ENST00000466508 MRPL12P52815 198 aaKnown RBP24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 ORC2Q13416 577 aaPredicted RBP24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 ZRSR1Q15695 479 aaKnown RBP24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 IL17AQ16552 155 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 LUZP1Q86V48 1076 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 GLT8D2Q9H1C3 349 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 PCDHA1Q9Y5I3 950 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 MYH7BA7E2Y1 1941 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 CLK2P49760 499 aaKnown RBP24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 STAT2P52630 851 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 LETM2Q2VYF4 491 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 KIAA1755Q5JYT7 1200 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 C11orf57Q6ZUT1 292 aaPredicted RBP24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 VCPKMTQ9H867 229 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 PSTPIP2Q9H939 334 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 RNF181Q9P0P0 153 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 USP25Q9UHP3 1055 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 TUBE1Q9UJT0 475 aa24.02■■□□□ 1.44
PPP1R3F-203ENST00000466508 LONP1P36776 959 aaKnown RBP24.01■■□□□ 1.43
PPP1R3F-203ENST00000466508 APOBEC3FQ8IUX4 373 aaKnown RBP24.01■■□□□ 1.43
PPP1R3F-203ENST00000466508 PDILTQ8N807 584 aa24.01■■□□□ 1.43
PPP1R3F-203ENST00000466508 ACTN4O43707 911 aaKnown RBP24■■□□□ 1.43
PPP1R3F-203ENST00000466508 CCNT1O60563 726 aaKnown RBP24■■□□□ 1.43
PPP1R3F-203ENST00000466508 PRPHP41219 470 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 PNOCQ13519 176 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 KANK3Q6NY19 840 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 AMNQ9BXJ7 453 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 TMEM60Q9H2L4 133 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 SERTAD1Q9UHV2 236 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 A0A087WWV3 80 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 MDM2Q00987 491 aaPredicted RBP24■■□□□ 1.43
PPP1R3F-203ENST00000466508 DTHD1Q6ZMT9 781 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 CEP57L1Q8IYX8 460 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 TRPM4Q8TD43 1214 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 GINM1Q9NU53 330 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 PRR12Q9ULL5 1215 aa24■■□□□ 1.43
PPP1R3F-203ENST00000466508 DOCK1Q14185 1865 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms