RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 PPP1R9AQ9ULJ8 1098 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 SLC12A7Q9Y666 1083 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 TAF6LQ9Y6J9 622 aa11.54□□□□□ -0.56
PMF1-204ENST00000466489 RLFQ13129 1914 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 A0A0G2JMZ2 1700 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
PMF1-204ENST00000466489 CTAGE5O15320 804 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 DHX16O60231 1041 aaKnown RBP11.53□□□□□ -0.56
PMF1-204ENST00000466489 PLA2G6O60733 806 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 DDAH1O94760 285 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 PDHBP11177 359 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 HOXD10P28358 340 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 DSG3P32926 999 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 LIFRP42702 1097 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 FCGRTP55899 365 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 KRT85P78386 507 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 SEC23AQ15436 765 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 C17orf99Q6UX52 265 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 KCTD1Q719H9 257 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 RUFY3Q7L099 469 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 CTCFLQ8NI51 663 aaPredicted RBP11.53□□□□□ -0.56
PMF1-204ENST00000466489 ZNF296Q8WUU4 475 aaPredicted RBP11.53□□□□□ -0.56
PMF1-204ENST00000466489 KIFC2Q96AC6 838 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 ZSCAN16Q9H4T2 348 aaPredicted RBP11.53□□□□□ -0.56
PMF1-204ENST00000466489 MORF4L1Q9UBU8 362 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 ADGRA2Q96PE1 1338 aa11.53□□□□□ -0.56
PMF1-204ENST00000466489 SH2B2O14492 632 aaPredicted RBP11.52□□□□□ -0.57
PMF1-204ENST00000466489 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
PMF1-204ENST00000466489 BCRP11274 1271 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 RPS6KB1P23443 525 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 MAPK4P31152 587 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 GNAQP50148 359 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 ANTXR2P58335 489 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 ERVK-9P63128 1117 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 ERVK-24P63145 666 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 LACTBP83111 547 aaPredicted RBP11.52□□□□□ -0.57
PMF1-204ENST00000466489 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 PLS1Q14651 629 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 ADCK5Q3MIX3 580 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 IGDCC4Q8TDY8 1250 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 NUP133Q8WUM0 1156 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 COA7Q96BR5 231 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
PMF1-204ENST00000466489 LY9Q9HBG7 655 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
PMF1-204ENST00000466489 ZDHHC9Q9Y397 364 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
PMF1-204ENST00000466489 VWA5AO00534 786 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 TNPO2O14787 897 aaKnown RBP11.51□□□□□ -0.57
PMF1-204ENST00000466489 SNHG28P0DPA3 235 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 RCAN1P53805 252 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 OAZ1P54368 228 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 TRAF1Q13077 416 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 WDR78Q5VTH9 848 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 SASS6Q6UVJ0 657 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 SGMS1Q86VZ5 419 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 ZNF654Q8IZM8 581 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 MAP3K14Q99558 947 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 LZTS2Q9BRK4 669 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 TEX13BQ9BXU2 312 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 RBSNQ9H1K0 784 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 GPCPD1Q9NPB8 672 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 DDX19AQ9NUU7 478 aaKnown RBP11.51□□□□□ -0.57
PMF1-204ENST00000466489 FBXO28Q9NVF7 368 aa11.51□□□□□ -0.57
PMF1-204ENST00000466489 FRMPD2Q68DX3 1309 aaPredicted RBP11.51□□□□□ -0.57
PMF1-204ENST00000466489 CCDC196A0A1B0GTZ2 297 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 SYCE3A1L190 88 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 ZBTB43O43298 467 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 NEMFO60524 1076 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 SLC25A27O95847 323 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 F13A1P00488 732 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 TUBB4AP04350 444 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 SYT1P21579 422 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 PSMC4P43686 418 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 PRMT2P55345 433 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 EXOSC10Q01780 885 aaKnown RBP11.5□□□□□ -0.57
PMF1-204ENST00000466489 GRM4Q14833 912 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 PPP2R5BQ15173 497 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 PKN2Q16513 984 aaKnown RBP11.5□□□□□ -0.57
PMF1-204ENST00000466489 BTNL9Q6UXG8 535 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 Q6ZUG5 572 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 CTU1Q7Z7A3 348 aaKnown RBP11.5□□□□□ -0.57
PMF1-204ENST00000466489 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 CD99L2Q8TCZ2 262 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 SPATC1LQ9H0A9 340 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 MROH8Q9H579 483 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 RBM28Q9NW13 759 aaKnown RBP11.5□□□□□ -0.57
PMF1-204ENST00000466489 RBPJLQ9UBG7 517 aa11.5□□□□□ -0.57
PMF1-204ENST00000466489 PLXNB2O15031 1838 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 KLF18A0A0U1RQI7 1052 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 KLRF2D3W0D1 207 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 GOLGA8HP0CJ92 632 aa11.49□□□□□ -0.57
PMF1-204ENST00000466489 STAT3P40763 770 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms