RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 KATNBL1Q9H079 304 aa17.4■□□□□ 0.38
CXCR4-203ENST00000466288 TSPYL2Q9H2G4 693 aaPredicted RBP17.4■□□□□ 0.38
CXCR4-203ENST00000466288 MYO9BQ13459 2157 aa17.4■□□□□ 0.38
CXCR4-203ENST00000466288 ATP2A1O14983 1001 aa17.39■□□□□ 0.37
CXCR4-203ENST00000466288 ADD2P35612 726 aa17.39■□□□□ 0.37
CXCR4-203ENST00000466288 RABGGTBP53611 331 aa17.39■□□□□ 0.37
CXCR4-203ENST00000466288 HIPK3Q9H422 1215 aa17.39■□□□□ 0.37
CXCR4-203ENST00000466288 MYOGP15173 224 aa17.38■□□□□ 0.37
CXCR4-203ENST00000466288 ARMCX2Q7L311 632 aa17.38■□□□□ 0.37
CXCR4-203ENST00000466288 PRPF38AQ8NAV1 312 aaKnown RBP17.38■□□□□ 0.37
CXCR4-203ENST00000466288 VWCEQ96DN2 955 aa17.38■□□□□ 0.37
CXCR4-203ENST00000466288 ASTN1O14525 1302 aa17.38■□□□□ 0.37
CXCR4-203ENST00000466288 ZBED9Q6R2W3 1325 aa17.38■□□□□ 0.37
CXCR4-203ENST00000466288 RLBP1P12271 317 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 KCNQ1P51787 676 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 BEX3Q00994 111 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 PPP2R2DQ66LE6 453 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 ITPRIPQ8IWB1 547 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 AMOTL1Q8IY63 956 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 CCDC144CPQ8IYA2 1237 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 CPXCR1Q8N123 301 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 MICALL1Q8N3F8 863 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 RHPN1Q8TCX5 695 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 ARIH1Q9Y4X5 557 aaPredicted RBP17.37■□□□□ 0.37
CXCR4-203ENST00000466288 GRIN2DO15399 1336 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 F5H6K3 240 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 ERC2O15083 957 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 NDUFB10O96000 172 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 CHGBP05060 677 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 SLC4A3P48751 1232 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 CCL23P55773 120 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 KLRC3Q07444 240 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 AAK1Q2M2I8 961 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 CTR9Q6PD62 1173 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 CXCL17Q6UXB2 119 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 ANKRD35Q8N283 1001 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 NOC4LQ9BVI4 516 aaKnown RBP17.37■□□□□ 0.37
CXCR4-203ENST00000466288 WNT8AQ9H1J5 351 aa17.37■□□□□ 0.37
CXCR4-203ENST00000466288 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.36■□□□□ 0.37
CXCR4-203ENST00000466288 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
CXCR4-203ENST00000466288 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
CXCR4-203ENST00000466288 EPHX3Q9H6B9 360 aa17.36■□□□□ 0.37
CXCR4-203ENST00000466288 SLC38A10Q9HBR0 1119 aa17.36■□□□□ 0.37
CXCR4-203ENST00000466288 RAVER2Q9HCJ3 691 aaKnown RBP17.36■□□□□ 0.37
CXCR4-203ENST00000466288 NYAP2Q9P242 653 aa17.36■□□□□ 0.37
CXCR4-203ENST00000466288 GNEQ9Y223 722 aaKnown RBP17.36■□□□□ 0.37
CXCR4-203ENST00000466288 PCDHA11Q9Y5I1 949 aa17.36■□□□□ 0.37
CXCR4-203ENST00000466288 SLC4A7Q9Y6M7 1214 aa17.36■□□□□ 0.37
CXCR4-203ENST00000466288 ZBED4O75132 1171 aa17.35■□□□□ 0.37
CXCR4-203ENST00000466288 CABYRO75952 493 aa17.35■□□□□ 0.37
CXCR4-203ENST00000466288 POU3F3P20264 500 aaPredicted RBP17.35■□□□□ 0.37
CXCR4-203ENST00000466288 TNFAIP2Q03169 654 aa17.35■□□□□ 0.37
CXCR4-203ENST00000466288 ITGA7Q13683 1181 aa17.35■□□□□ 0.37
CXCR4-203ENST00000466288 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
CXCR4-203ENST00000466288 PAG1Q9NWQ8 432 aa17.35■□□□□ 0.37
CXCR4-203ENST00000466288 B4GALT4O60513 344 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 HSP90AB4PQ58FF6 505 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 CLASRPQ8N2M8 674 aaKnown RBP17.34■□□□□ 0.37
CXCR4-203ENST00000466288 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 KIFC2Q96AC6 838 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 FBXO40Q9UH90 709 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 MTCH2Q9Y6C9 303 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 SLC4A4Q9Y6R1 1079 aa17.34■□□□□ 0.37
CXCR4-203ENST00000466288 CCER2I3L3R5 266 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 RFXAPO00287 272 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 RASA1P20936 1047 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 PTGS1P23219 599 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 CNTN2Q02246 1040 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 SKIV2LQ15477 1246 aaKnown RBP17.33■□□□□ 0.37
CXCR4-203ENST00000466288 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.37
CXCR4-203ENST00000466288 FAM133AQ8N9E0 248 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 AGBL1Q96MI9 1066 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 BOLA2Q9H3K6 86 aa17.33■□□□□ 0.37
CXCR4-203ENST00000466288 MYH8P13535 1937 aa17.33■□□□□ 0.36
CXCR4-203ENST00000466288 TCF20Q9UGU0 1960 aaKnown RBP17.33■□□□□ 0.36
CXCR4-203ENST00000466288 BAZ2AQ9UIF9 1905 aaKnown RBP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 IFIT2P09913 472 aaKnown RBP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 ATP2A2P16615 1042 aaKnown RBP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 OAZ1P54368 228 aa17.32■□□□□ 0.36
CXCR4-203ENST00000466288 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
CXCR4-203ENST00000466288 FSCN1Q16658 493 aaKnown RBP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 NOL8Q76FK4 1167 aaKnown RBP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 TLK2Q86UE8 772 aa17.32■□□□□ 0.36
CXCR4-203ENST00000466288 SCLYQ96I15 445 aa17.32■□□□□ 0.36
CXCR4-203ENST00000466288 SEZ6LQ9BYH1 1024 aa17.32■□□□□ 0.36
CXCR4-203ENST00000466288 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 HCN4Q9Y3Q4 1203 aa17.32■□□□□ 0.36
CXCR4-203ENST00000466288 CTDP1Q9Y5B0 961 aaPredicted RBP17.32■□□□□ 0.36
CXCR4-203ENST00000466288 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
CXCR4-203ENST00000466288 ARPP21Q9UBL0 812 aaPredicted RBP17.31■□□□□ 0.36
CXCR4-203ENST00000466288 CLIP2Q9UDT6 1046 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 GBF1Q92538 1859 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 IGKV6D-41A0A0C4DH26 115 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 SOWAHBA6NEL2 793 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 EPOPA6NHQ4 379 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 ZBBXA8MT70 800 aa17.31■□□□□ 0.36
CXCR4-203ENST00000466288 DYNC1LI2O43237 492 aaPredicted RBP17.31■□□□□ 0.36
CXCR4-203ENST00000466288 TLL1O43897 1013 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms