RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 AAMPQ13685 434 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 PLS1Q14651 629 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 ANGPT1Q15389 498 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 PCSK9Q8NBP7 692 aaKnown RBP12.84□□□□□ -0.35
CSF3R-208ENST00000466138 RUBCNQ92622 972 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 HAUS7Q99871 368 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 CTNNA3Q9UI47 895 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 CD207Q9UJ71 328 aa12.84□□□□□ -0.35
CSF3R-208ENST00000466138 ZHX1Q9UKY1 873 aaPredicted RBP12.84□□□□□ -0.35
CSF3R-208ENST00000466138 CDV3Q9UKY7 258 aaKnown RBP12.84□□□□□ -0.35
CSF3R-208ENST00000466138 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 GRM8O00222 908 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 LINC01565O15544 149 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 STRNO43815 780 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 TBC1D12O60347 775 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 TBX10O75333 385 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 GDF11O95390 407 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 GTF2F1P35269 517 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSF3R-208ENST00000466138 DEFB103AP81534 67 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 BEX3Q00994 111 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 PPM1JQ5JR12 505 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 CXCL17Q6UXB2 119 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 PUS3Q9BZE2 481 aaKnown RBP12.83□□□□□ -0.36
CSF3R-208ENST00000466138 NSUN3Q9H649 340 aaKnown RBP12.83□□□□□ -0.36
CSF3R-208ENST00000466138 ZMIZ1Q9ULJ6 1067 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 CNPY2Q9Y2B0 182 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 SCN5AQ14524 2016 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.36
CSF3R-208ENST00000466138 ASH1LQ9NR48 2969 aaKnown RBP12.82□□□□□ -0.36
CSF3R-208ENST00000466138 GCN1Q92616 2671 aaKnown RBP12.82□□□□□ -0.36
CSF3R-208ENST00000466138 GNAI3P08754 354 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
CSF3R-208ENST00000466138 USP17L2Q6R6M4 530 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 LRSAM1Q6UWE0 723 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 MFSD1Q9H3U5 465 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
CSF3R-208ENST00000466138 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 FAM184BQ9ULE4 1060 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 TNKSO95271 1327 aa12.82□□□□□ -0.36
CSF3R-208ENST00000466138 ZFYVE26Q68DK2 2539 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
CSF3R-208ENST00000466138 NEFLP07196 543 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 SP100P23497 879 aaPredicted RBP12.81□□□□□ -0.36
CSF3R-208ENST00000466138 PSMC6P62333 389 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 ITGA7Q13683 1181 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 CCDC57Q2TAC2 916 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 CATSPERGQ6ZRH7 1159 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 SPC25Q9HBM1 224 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
CSF3R-208ENST00000466138 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 ANGPTL2Q9UKU9 493 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 LHX6Q9UPM6 363 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 PCDHB15Q9Y5E8 787 aa12.81□□□□□ -0.36
CSF3R-208ENST00000466138 ADCY6O43306 1168 aa12.8□□□□□ -0.36
CSF3R-208ENST00000466138 LDHBP07195 334 aaKnown RBP12.8□□□□□ -0.36
CSF3R-208ENST00000466138 WDR5P61964 334 aaKnown RBP12.8□□□□□ -0.36
CSF3R-208ENST00000466138 GPM6BQ13491 265 aa12.8□□□□□ -0.36
CSF3R-208ENST00000466138 COL19A1Q14993 1142 aa12.8□□□□□ -0.36
CSF3R-208ENST00000466138 FLCNQ8NFG4 579 aa12.8□□□□□ -0.36
CSF3R-208ENST00000466138 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
CSF3R-208ENST00000466138 FEZ1Q99689 392 aa12.8□□□□□ -0.36
CSF3R-208ENST00000466138 SIP14410 1827 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 GNAI2P04899 355 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 SDHBP21912 280 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
CSF3R-208ENST00000466138 ICAM3P32942 547 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 FOXO4P98177 505 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 HYAL1Q12794 435 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 CBX2Q14781 532 aaPredicted RBP12.79□□□□□ -0.36
CSF3R-208ENST00000466138 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 SIRT2Q8IXJ6 389 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 RAD9AQ99638 391 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 SPATC1LQ9H0A9 340 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 TRMT13Q9NUP7 481 aaKnown RBP12.79□□□□□ -0.36
CSF3R-208ENST00000466138 GRIN2DO15399 1336 aa12.79□□□□□ -0.36
CSF3R-208ENST00000466138 PTPRSQ13332 1948 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 SPEGQ15772 3267 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 DUSP11O75319 330 aaKnown RBP12.78□□□□□ -0.36
CSF3R-208ENST00000466138 ASNSP08243 561 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 UBTFL1P0CB47 393 aaPredicted RBP12.78□□□□□ -0.36
CSF3R-208ENST00000466138 NDUFV1P49821 464 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 ATP8B2P98198 1209 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 RING1Q06587 406 aa12.78□□□□□ -0.36
CSF3R-208ENST00000466138 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
CSF3R-208ENST00000466138 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms