RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MGAMO43451 1857 aa12.91□□□□□ -0.34
VCP-204ENST00000466100 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 FDX1P10109 184 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 CYP2C8P10632 490 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 OSBPP22059 807 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 SLC4A3P48751 1232 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 SSRP1Q08945 709 aaKnown RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 HOMER1Q86YM7 354 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 TRIM22Q8IYM9 498 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 RRP36Q96EU6 259 aaKnown RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 DDX11Q96FC9 970 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 AIFM3Q96NN9 605 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 VAT1LQ9HCJ6 419 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
VCP-204ENST00000466100 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
VCP-204ENST00000466100 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.35
VCP-204ENST00000466100 DEXIO95424 95 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 ICAM1P05362 532 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 SCG2P13521 617 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
VCP-204ENST00000466100 GJB2P29033 226 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 MAP2K2P36507 400 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 OAZ1P54368 228 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 TMEM132BQ14DG7 1078 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 WWC2Q6AWC2 1192 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 MB21D1Q8N884 522 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 PARK7Q99497 189 aaKnown RBP12.89□□□□□ -0.35
VCP-204ENST00000466100 TXNRD2Q9NNW7 524 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 BTBD7Q9P203 1132 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 MYH15Q9Y2K3 1946 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 DOCK3Q8IZD9 2030 aa12.89□□□□□ -0.35
VCP-204ENST00000466100 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 STXBP3O00186 592 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 PEX10O60683 326 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
VCP-204ENST00000466100 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
VCP-204ENST00000466100 GPKOWQ92917 476 aaPredicted RBP eCLIP12.88□□□□□ -0.35
VCP-204ENST00000466100 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 BARHL2Q9NY43 387 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 MORF4L1Q9UBU8 362 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 SEC63Q9UGP8 760 aaKnown RBP12.88□□□□□ -0.35
VCP-204ENST00000466100 RABGAP1Q9Y3P9 1069 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 ZNF236Q9UL36 1845 aa12.88□□□□□ -0.35
VCP-204ENST00000466100 hCG_1984214I3L0E3 225 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 OPLAHO14841 1288 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 ZBED4O75132 1171 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 BCRP11274 1271 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 DDIT3P35638 169 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 GCLCP48506 637 aaPredicted RBP12.87□□□□□ -0.35
VCP-204ENST00000466100 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
VCP-204ENST00000466100 TAF1CQ15572 869 aaPredicted RBP12.87□□□□□ -0.35
VCP-204ENST00000466100 OTUD7BQ6GQQ9 843 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 PPP1R18Q6NYC8 613 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 CCDC174Q6PII3 467 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 ZNF713Q8N859 430 aaPredicted RBP12.87□□□□□ -0.35
VCP-204ENST00000466100 AGBL1Q96MI9 1066 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
VCP-204ENST00000466100 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
VCP-204ENST00000466100 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
VCP-204ENST00000466100 CENPFP49454 3210 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 CA12O43570 354 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 ERVK-24P63145 666 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 CRHR2Q13324 411 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 NPY5RQ15761 445 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 HEATR3Q7Z4Q2 680 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
VCP-204ENST00000466100 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 SPRYD3Q8NCJ5 442 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
VCP-204ENST00000466100 WASF1Q92558 559 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 COA7Q96BR5 231 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 TEX13BQ9BXU2 312 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 SPATC1LQ9H0A9 340 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 SH3GLB2Q9NR46 395 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 GJB4Q9NTQ9 266 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 VPS54Q9P1Q0 977 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 RIPK3Q9Y572 518 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 ABCB11O95342 1321 aa12.86□□□□□ -0.35
VCP-204ENST00000466100 ESYT2A0FGR8 921 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 TLR2O60603 784 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
VCP-204ENST00000466100 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
VCP-204ENST00000466100 STAT3P40763 770 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms