RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 U2AF1L5P0DN76 240 aaPredicted RBP6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 U2AF1Q01081 240 aaKnown RBP eCLIP6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 ID3Q02535 119 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 PPP2R3AQ06190 1150 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 COL19A1Q14993 1142 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 C1orf141Q5JVX7 400 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 FBXL18Q96ME1 805 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 PLEKHF1Q96S99 279 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 ATXN3LQ9H3M9 355 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 SLC52A2Q9HAB3 445 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 PIDD1Q9HB75 910 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 DISC1Q9NRI5 854 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 PPP4R2Q9NY27 417 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 TFCP2L1Q9NZI6 479 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 KCNQ3O43525 872 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 XRCC5P13010 732 aaKnown RBP6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 MAPK1P28482 360 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 ZEB1P37275 1124 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 PLCB3Q01970 1234 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 CDK5R2Q13319 367 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 DCTN1Q14203 1278 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 TTLL4Q14679 1199 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 ENOX2Q16206 610 aaKnown RBP6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 CCDC184Q52MB2 194 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 SULF2Q8IWU5 870 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 TP53INP2Q8IXH6 220 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 SMARCC1Q92922 1105 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 KCNB2Q92953 911 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 CFAP53Q96M91 514 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 PRKRIP1Q9H875 184 aaPredicted RBP6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 SPON1Q9HCB6 807 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 AKAP2Q9Y2D5 859 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 RNF114Q9Y508 228 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 CEMIPQ8WUJ3 1361 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 MAP3K5Q99683 1374 aa6.39□□□□□ -1.39
EXOSC3-204ENST00000465860 HSP90AB1P08238 724 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 TXKP42681 527 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 RALBP1Q15311 655 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 CBLL1Q75N03 491 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 MCM10Q7L590 875 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 SMYD4Q8IYR2 804 aaPredicted RBP6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 FLCNQ8NFG4 579 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 MTFR1LQ9H019 292 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 PAK6Q9NQU5 681 aaPredicted RBP6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 MYBBP1AQ9BQG0 1328 aaKnown RBP6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 KDM3BQ7LBC6 1761 aa6.38□□□□□ -1.39
EXOSC3-204ENST00000465860 KIAA1551Q9HCM1 1747 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 PRAMEF22A3QJZ6 481 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 GNAT3A8MTJ3 354 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 FAM87AP0C7U9 286 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 HCLS1P14317 486 aaPredicted RBP6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 ARNTP27540 789 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 CYP27C1Q4G0S4 372 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 DNAJC10Q8IXB1 793 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 C3orf58Q8NDZ4 430 aa6.37□□□□□ -1.39
EXOSC3-204ENST00000465860 RNGTTO60942 597 aaKnown RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 NEFMP07197 916 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 NME2P22392 152 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 CRKLP46109 303 aaKnown RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 MAP1SQ66K74 1059 aaPredicted RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 CCDC146Q8IYE0 955 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 BCL7CQ8WUZ0 217 aaPredicted RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 ZNF496Q96IT1 587 aaPredicted RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 SETDB2Q96T68 719 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 THUMPD2Q9BTF0 503 aaKnown RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 MIS18AQ9NYP9 233 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 NUDCQ9Y266 331 aa6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 AFDNP55196 1824 aaKnown RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 N4BP2Q86UW6 1770 aaPredicted RBP6.36□□□□□ -1.39
EXOSC3-204ENST00000465860 KIF13BQ9NQT8 1826 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 CYP19A1P11511 503 aaPredicted RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 MAPK8P45983 427 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 HNRNPUQ00839 825 aaKnown RBP eCLIP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 ZNF252P-AS1Q0IIN9 211 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 ZC3H12AQ5D1E8 599 aaKnown RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 ZNF790Q6PG37 636 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 ZNF574Q6ZN55 896 aaPredicted RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 PLD6Q8N2A8 252 aaKnown RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 FAM181AQ8N9Y4 354 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 AGBL5Q8NDL9 886 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 NLGN2Q8NFZ4 835 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 GPBAR1Q8TDU6 330 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 NECAB3Q96P71 396 aaPredicted RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 SYT17Q9BSW7 474 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 SRP68Q9UHB9 627 aaKnown RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 PCOLCE2Q9UKZ9 415 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 RRP7AQ9Y3A4 280 aaKnown RBP6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 U3KQE9 123 aa6.35□□□□□ -1.39
EXOSC3-204ENST00000465860 LAMB4A4D0S4 1761 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 CNTNAP4Q9C0A0 1308 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 LEFTY1O75610 366 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 RPS6KA4O75676 772 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 PIP4K2AP48426 406 aaPredicted RBP6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 FMR1Q06787 632 aaKnown RBP eCLIP6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 TEFQ10587 303 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 NFE2L2Q16236 605 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 TPTE2Q6XPS3 522 aa6.34□□□□□ -1.39
EXOSC3-204ENST00000465860 SPRED2Q7Z698 418 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms