RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ANKRD18AQ8IVF6 992 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 LACRTQ9GZZ8 138 aa22.06■■□□□ 1.12
SDF4-205ENST00000465727 WNT7AO00755 349 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 CALM1P0DP23 149 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 CALM2P0DP24 149 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 CALM3P0DP25 149 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 LONP1P36776 959 aaKnown RBP22.05■■□□□ 1.12
SDF4-205ENST00000465727 CNPY4Q8N129 248 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 RUFY1Q96T51 708 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 LRP5O75197 1615 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 ZNF185O15231 689 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 ZEB2O60315 1214 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 FGFR2P21802 821 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 HNRNPH1P31943 449 aaKnown RBP22.05■■□□□ 1.12
SDF4-205ENST00000465727 FIGNQ5HY92 759 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 CREG2Q8IUH2 290 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 CAVIN3Q969G5 261 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 EXOC1Q9NV70 894 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 GDAQ9Y2T3 454 aa22.05■■□□□ 1.12
SDF4-205ENST00000465727 MROH5Q6ZUA9 1318 aa22.04■■□□□ 1.12
SDF4-205ENST00000465727 PSMA7O14818 248 aa22.04■■□□□ 1.12
SDF4-205ENST00000465727 TRIM21P19474 475 aaKnown RBP22.04■■□□□ 1.12
SDF4-205ENST00000465727 PPARAQ07869 468 aa22.04■■□□□ 1.12
SDF4-205ENST00000465727 NNTQ13423 1086 aa22.04■■□□□ 1.12
SDF4-205ENST00000465727 NPY5RQ15761 445 aa22.04■■□□□ 1.12
SDF4-205ENST00000465727 ANAPC4Q9UJX5 808 aa22.04■■□□□ 1.12
SDF4-205ENST00000465727 A0A1W2PQJ5 194 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 RCCD1A6NED2 376 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 NUTM2BA6NNL0 878 aaPredicted RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 NUTM2EB1AL46 878 aaPredicted RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 USO1O60763 962 aaKnown RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 TACC1O75410 805 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 SKIDA1Q1XH10 827 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 CATIPQ7Z7H3 387 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 RPAINQ86UA6 219 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 TFR2Q9UP52 801 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 V9GY48 417 aaPredicted RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 PES1O00541 588 aaKnown RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 PRKAB2O43741 272 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 HSF2BPO75031 334 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 TCP1P17987 556 aaKnown RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 APBA1Q02410 837 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 LCORLQ8N3X6 602 aa22.03■■□□□ 1.12
SDF4-205ENST00000465727 PRPF38AQ8NAV1 312 aaKnown RBP22.03■■□□□ 1.12
SDF4-205ENST00000465727 DLEC1Q9Y238 1755 aa22.02■■□□□ 1.12
SDF4-205ENST00000465727 SLC5A1P13866 664 aa22.02■■□□□ 1.12
SDF4-205ENST00000465727 NKX1-1Q15270 411 aaPredicted RBP22.02■■□□□ 1.12
SDF4-205ENST00000465727 SPA17Q15506 151 aa22.02■■□□□ 1.12
SDF4-205ENST00000465727 GIGYF2Q6Y7W6 1299 aaKnown RBP22.02■■□□□ 1.12
SDF4-205ENST00000465727 TRIM47Q96LD4 638 aa22.02■■□□□ 1.12
SDF4-205ENST00000465727 PAGR1Q9BTK6 254 aa22.02■■□□□ 1.12
SDF4-205ENST00000465727 TRIM49BA6NDI0 452 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 PRDM1O75626 825 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 STAT6P42226 847 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 MNAT1P51948 309 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 SETQ01105 290 aaPredicted RBP22.02■■□□□ 1.11
SDF4-205ENST00000465727 RASGRF1Q13972 1273 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 SPATA4Q8NEY3 305 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 STIM2Q9P246 746 aa22.02■■□□□ 1.11
SDF4-205ENST00000465727 SPATA31A3Q5VYP0 1347 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 KIAA0754O94854 1291 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 GLE1Q53GS7 698 aaKnown RBP22.01■■□□□ 1.11
SDF4-205ENST00000465727 YTHDF3Q7Z739 585 aaKnown RBP22.01■■□□□ 1.11
SDF4-205ENST00000465727 FAM114A1Q8IWE2 563 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 ZCRB1Q8TBF4 217 aaKnown RBP22.01■■□□□ 1.11
SDF4-205ENST00000465727 LRRC1Q9BTT6 524 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 AGPAT5Q9NUQ2 364 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 MAPK8IP1Q9UQF2 711 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 ANKRD36CQ5JPF3 1778 aa22.01■■□□□ 1.11
SDF4-205ENST00000465727 MACROD2A1Z1Q3 448 aa22■■□□□ 1.11
SDF4-205ENST00000465727 NDUFAB1O14561 156 aa22■■□□□ 1.11
SDF4-205ENST00000465727 DDAH1O94760 285 aa22■■□□□ 1.11
SDF4-205ENST00000465727 FSBPO95073 299 aa22■■□□□ 1.11
SDF4-205ENST00000465727 KCNV1Q6PIU1 500 aa22■■□□□ 1.11
SDF4-205ENST00000465727 PPP1R3FQ6ZSY5 799 aaPredicted RBP22■■□□□ 1.11
SDF4-205ENST00000465727 MICALCLQ6ZW33 695 aa22■■□□□ 1.11
SDF4-205ENST00000465727 CCDC155Q8N6L0 562 aa22■■□□□ 1.11
SDF4-205ENST00000465727 ENAHQ8N8S7 591 aaPredicted RBP22■■□□□ 1.11
SDF4-205ENST00000465727 DHTKD1Q96HY7 919 aaPredicted RBP22■■□□□ 1.11
SDF4-205ENST00000465727 ZSCAN10Q96SZ4 725 aaPredicted RBP22■■□□□ 1.11
SDF4-205ENST00000465727 TUBGCP2Q9BSJ2 902 aa22■■□□□ 1.11
SDF4-205ENST00000465727 A1CFQ9NQ94 594 aaKnown RBP22■■□□□ 1.11
SDF4-205ENST00000465727 DISC1Q9NRI5 854 aa22■■□□□ 1.11
SDF4-205ENST00000465727 B4DLN1 442 aa22■■□□□ 1.11
SDF4-205ENST00000465727 TOM1O60784 492 aa22■■□□□ 1.11
SDF4-205ENST00000465727 RHOBTB3O94955 611 aa22■■□□□ 1.11
SDF4-205ENST00000465727 IL17AQ16552 155 aa22■■□□□ 1.11
SDF4-205ENST00000465727 NLRP10Q86W26 655 aa22■■□□□ 1.11
SDF4-205ENST00000465727 CCDC42Q96M95 316 aa22■■□□□ 1.11
SDF4-205ENST00000465727 ALS2CR12Q96Q35 445 aa22■■□□□ 1.11
SDF4-205ENST00000465727 TACO1Q9BSH4 297 aaKnown RBP22■■□□□ 1.11
SDF4-205ENST00000465727 SH2D4AQ9H788 454 aa22■■□□□ 1.11
SDF4-205ENST00000465727 DMGDHQ9UI17 866 aaKnown RBP22■■□□□ 1.11
SDF4-205ENST00000465727 HYOU1Q9Y4L1 999 aa22■■□□□ 1.11
SDF4-205ENST00000465727 LOC102724159A0A0B4J2E5 919 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 HNRNPH3P31942 346 aaKnown RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 PWP2Q15269 919 aaKnown RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 IFIT1BQ5T764 474 aaKnown RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 EMC10Q5UCC4 262 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 TTI2Q6NXR4 508 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms